Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01980 ATGGCGGACCAGAGGAACCGTTGGAGCTGGGACGTTGCAGGCTTCGACCCATGGAAGTCCTCTCCGCCGTCGCAATCTCCCTCGTCTCCGGTGGAGCTACCTGATCGGAAACCTACTGCGCCATTGATACGGCGCTACTCCATTTCTGCTACGTCGGTTCTTCCGCAACCCAAACAGTCCGTTGCCTTTAAGTTTCAACGGTTGAAGGACAAAGTCAAGCTTGCTAGAGAAGACTATATGCAATTAAGACAAGAAGCAAATGAACTCCAAGAATATTCAAATGCAAAACTTGATCGAGTTACGAGATATCTGGGTGTTCTTGCAGAGAAAACCCGCAAGCTAGATCAAGTTGCCCTTCAAACTGAAGCAAGAATAGCTCCAGTCATCAATGAGAAAAGAAGATTATTCAATGATTTATTAACATCTAAAGGAAACATACGAGTATTCTGCCGGGCAAGGCCATTATTTGAAGATGAAGGTCCTTCAATTGTTGAATTTCCAGATGACTATACCATTAGTGTAAATACTGGTGATGAATCCTTGTCTAATGCCAAGAAAGACTTTGAATTTGACCGAGTTTATGGACCTCATGTGGGTCAAGCTGAGTTATTCAGTGATGTTCAACCACTGGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCATATGGGCAAACCCATTCTGGAAAGACACACACTATGGAAGGATCAAGCTATGATCGGGGTTTATATGCTCGTTGTTTTGAGGAGTTGTTTGATTTATCCAATTTGGATACAACTTCTACTTCTCAATATAAATTCTGTGTTACAGTTTGTGAGTTATATAATGAACAGACCAGGGATCTACTGTTGGAGGCAGGGAAAAACAGTCCTAAACTCAGCTTAGGATCACCTGAATGTTTTGTAGAACTGGTGCAGGAAAAAGTTGACAATCCTCTTGAGTTTTCTGCAGTTTTAAAAACTGCATTACAGACTCGGGAAAATGGTTTATCAAAGAATAATGTTTCTCATTTGATTGTCACGGTACACATATTTTATAACAATTTGATCACTGGTGAAAACTCATACAGTAAACTCTATCTGGTTGATTTAGCTGGAAGTGAAGGTTTAATAACAGAAGATGATAGTGGGGACCGTGTCACAGATTTGCTGCATGTTATGAAGTCTCTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTAACATCAAAGAAAGATGTAATACCTTACGAAAATTCAGTGCTAACAAAACTGCTTGCAGATTCACTTGGTGGGAGTTCAAAAACCCTGATGATTGTGAATGTGTGTCCATGTATATCAAATTTATCCGAGACATTGTCGTCTCTCAATTTCTCTGCTAGAGCTCGAAATTCTGTATTAAGCCTGGGAAACCGAGACACAATTAAGAAGTGGAGAGATGTTGCAAATGATGCACGAAAGGAGCTCTACGAGAAAGAAAAAGAAGTCAATGATCTAAAGCAAGAGGGTTTGGAGCTCAAGCAGGCACTTAAAGATGCAAATGATCAGTGTGTTTTACTATTCAATGAAGTGCAGAAGGCATGGAAAGTTTCTTCTGCATTGCAGACTGATTTAAAGTCGGAGCATGTTTTGCTGTCAGATAAACATAAGATAGAGAAAGAACAAAATACTCAGCTTAGAAATGAAGTTGCTCAACTTCTACGGGTAGAGCAAGATCAAAAATTGCAGATACAAGAGCAAGATTCAACCATCCAAAGTTTGCAGGCTAAAATTAGGACCCTGGAAACTCAACTCAATGAAACTATTAAAGCTCAATCCAGGTCAACACCTGTATCAGAGCCAGATTCTACTGATCTATCCAATTCTAAACTTACTGGAGATAGCATAGACTCTTCTGCAGTAACCAAAAAACTAGAAGAGGAACTCAAGAAACGTGATGCGTTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTGTTTGATAGATTAACTCAGAAAGCATCTACGGCTGGATCACCTAAGTTGTCAAGTCCATTAGCTCGTGGGTCCTCTAATGTTCATTTTCGGGATATGGGAAGAAATGGCACCAGCAACAATACAAGTTCTCGTTCTGTGGATGTCCTTCCTTCACCTTTGGCCGTTGATAAAAATGATGGCACAGTTGCCCTAGTTAAAACTGGCTCTGAAATAGTTAAGAGTACCCCTGCAGGTGAATATCTTACTGCTGCTTTGAATGACTTTGATGCGGACCAATATGAAGGGCATGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCCTCCAGGGAACATGAAATTCTTGCTGAAATTAGGGATTCTGTTTTCTCTTTTATTAGAAAGATGGAACCTAAACGAGTAATGGACACCATGCTTGTTTCCCGTGTTAGAATTCTGTATATAAGATCTTTGCTTGCAAGATCCCCAGAGTTGCAATCAATTAAGGTTTTGCCAGTTGAGTGCTTTCTTGCAAAGACTAATACTGGGCGAAGTAGAAGTTCCAGCCGAGGTAGTAGTCCTGGTAGGTCACCTGTGCTATATGTTGACGAGCAGATCCAGGGATTTAAAGTGAATCTAAAGCCAGAAAAGAAATCAAAATTTTCATCTGTTGTGCTGAAGATACGTGGGATTGATGAGGACATCTGGAGACAGCAGGTAACTGGTGGAAAGCTTAGGGAAATTACTGAGGAAGCCAAAAGTTTCGCAATGGGGAACAAAGCTCTTGCTGCACTCTTTGTACATACACCTGCTGGTGAGTTACAGCGCCAAATTAGATCCTGGCTTGCAGAGAATTTTGAGTTTCTATCAGTATCTGGGGATGATGCATCGGGGGGGTCAACTGGTCAGTTGGAACTTCTTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGTGCTGCTCTTCCTCCCCAAACTGATGCCCTTGGCCAGCTATTGTTTGAATATTCAAAACGTGTCTATACTTCTCAACTACAACACTTGAAGGATATTGCTGGTACCTTGGCAACAGAGGAGGCTGAAGATGCAGCACAAGTAGCTAAGCTACGTTCAGCTCTAGAATCGGTTGAACATAAAAGAAGAAAGATTCTGCAACAAATGAAAAGTGATATAGCTTTGTTAACGTTAGAAAATGGAGGTTCCCCTATTCAAAATCCTTCTACTGCAGCTGAAGATGCGCGATTGGCATCTCTTATTTCGCTTGATAGCATATTAAAGCAAATCAAGGATATGACAAGACTTTCTTCCGTGAACATCTTGAGCAAAAGTAAGAAAAAGATGATGCTTGCTTCTCTAGATGAACTAACAGAACAGATGCCTTCACTTCTCGAAATTGATCACCCATGTGCTCAGAGGCACATTGCAGATGCTCGCTACATGGTTGAGTCAATTCCTGAAGAAGATGACCCCATTCAAGATATATCTCATGTTCGCAAGCCATCAACAGATCTGAGCTCTGGATCTGAAACCGACGTGGCACAATGGAATGTACTCCAATTTAATACCGGCTCGACATTACCCTTTATAATAAAATGTGGTGCAAACTCTAATTCGGAATTGGTGATTAAAGCTGATGCACGAGTTCAGGAACCTAAAGGTGGTGAGATTGTGAGGGTTGCCCCTAGACCCTCCGTTTTGGAAAATATGAACTTGGATGAAATGAAACAAGTATTTAGTGAACTACCCGAGGCTCTAAGCTTGCTGGCTCTAGCAAGGACTGCAGATGGCACACGAGCACGTTATTCTAGATTATATAGGACCTTGGCTACGAAGGTTCCATCGCTTAAGGATTTGGTGAGCGAGCTCGAAAAAGGGGGTGCACTCAAAGATGTTAGAACGTGA 3876 0.4151 MADQRNRWSWDVAGFDPWKSSPPSQSPSSPVELPDRKPTAPLIRRYSISATSVLPQPKQSVAFKFQRLKDKVKLAREDYMQLRQEANELQEYSNAKLDRVTRYLGVLAEKTRKLDQVALQTEARIAPVINEKRRLFNDLLTSKGNIRVFCRARPLFEDEGPSIVEFPDDYTISVNTGDESLSNAKKDFEFDRVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLSNLDTTSTSQYKFCVTVCELYNEQTRDLLLEAGKNSPKLSLGSPECFVELVQEKVDNPLEFSAVLKTALQTRENGLSKNNVSHLIVTVHIFYNNLITGENSYSKLYLVDLAGSEGLITEDDSGDRVTDLLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTKLLADSLGGSSKTLMIVNVCPCISNLSETLSSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELYEKEKEVNDLKQEGLELKQALKDANDQCVLLFNEVQKAWKVSSALQTDLKSEHVLLSDKHKIEKEQNTQLRNEVAQLLRVEQDQKLQIQEQDSTIQSLQAKIRTLETQLNETIKAQSRSTPVSEPDSTDLSNSKLTGDSIDSSAVTKKLEEELKKRDALIERLHEENEKLFDRLTQKASTAGSPKLSSPLARGSSNVHFRDMGRNGTSNNTSSRSVDVLPSPLAVDKNDGTVALVKTGSEIVKSTPAGEYLTAALNDFDADQYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDSVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLAKTNTGRSRSSSRGSSPGRSPVLYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDEDIWRQQVTGGKLREITEEAKSFAMGNKALAALFVHTPAGELQRQIRSWLAENFEFLSVSGDDASGGSTGQLELLSTAIMDGWMAGLGAALPPQTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEEAEDAAQVAKLRSALESVEHKRRKILQQMKSDIALLTLENGGSPIQNPSTAAEDARLASLISLDSILKQIKDMTRLSSVNILSKSKKKMMLASLDELTEQMPSLLEIDHPCAQRHIADARYMVESIPEEDDPIQDISHVRKPSTDLSSGSETDVAQWNVLQFNTGSTLPFIIKCGANSNSELVIKADARVQEPKGGEIVRVAPRPSVLENMNLDEMKQVFSELPEALSLLALARTADGTRARYSRLYRTLATKVPSLKDLVSELEKGGALKDVRT* 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01980 1291 MobiDBLite consensus disorder prediction 656 704 - -
Lapu3g01980 1291 MobiDBLite consensus disorder prediction 1 37 - -
Lapu3g01980 1291 Coils Coil 629 652 - -
Lapu3g01980 1291 Coils Coil 571 598 - -
Lapu3g01980 1291 MobiDBLite consensus disorder prediction 657 701 - -
Lapu3g01980 1291 Coils Coil 469 510 - -
Lapu3g01980 1291 ProSitePatterns Kinesin motor domain signature. 359 370 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu3g01980 1291 Gene3D Kinesin motor domain 89 459 IPR036961 -
Lapu3g01980 1291 SMART kinesin_4 143 467 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01980 1291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 498 IPR027417 -
Lapu3g01980 1291 Pfam Kinesin motor domain 151 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01980 1291 Coils Coil 1024 1044 - -
Lapu3g01980 1291 PRINTS Kinesin heavy chain signature 217 238 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01980 1291 PRINTS Kinesin heavy chain signature 409 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01980 1291 PRINTS Kinesin heavy chain signature 360 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01980 1291 MobiDBLite consensus disorder prediction 595 622 - -
Lapu3g01980 1291 FunFam kinesin-like protein KIN-14B isoform X1 92 460 - -
Lapu3g01980 1291 Coils Coil 543 563 - -
Lapu3g01980 1291 PANTHER KINESIN-LIKE PROTEIN KLP-3 540 1236 IPR027640 GO:0003777|GO:0007018
Lapu3g01980 1291 Coils Coil 65 92 - -
Lapu3g01980 1291 ProSiteProfiles Kinesin motor domain profile. 145 459 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01980 Lapu-Chr3 37462545 37483971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01980 132 460 Calmodulin-binding Proteins AT5G65930 37.830 1.01e-51 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01980 - - gmx:100796816 2266.89