Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01979 ATGAAACAAAAACCGGACACAGACAACCACGCATCATCGGAAGGAACCGGAGACTCCGACACCGATTCCCTGCTTCGGCCTGCTCTTTCCCTCCTCAACCGTCGCACTTTCACCGCCTGTCGCGACTTCACTCGTAAGATCGCCAGATCCGACCCTAAAGCATCTATCCAAATCGACCAAATCCTTGCTGTCGCGGACGTTCTTGCCGCGGCAGAGCGCCGCCATGACCCGCTCGACTGGTACTCCATCCTGCGCCTCAATCCTGGCGACGCCGCCGCGGACCGCGACCTCGTCCGGCAACAGTTCAAGACCCTAGTGCGTCTCCTGGACCCTAACAAGAACAAGTTCCCCTTCGCTGACGAGGCCCTCATGCGCGTGCGCGAAGCCTGGCGTGTTCTCTCTGATCCCATACTCAAGGCCAGTTTTGATAGCAGGGTTCAAGACGCAGGTTCTTCGTTTTGGACCATGTGCCCCTACTGCTGGTACCTCCACGAATACCAGAAGTGCTACGAGGATTGCTCGCTCAGGTGCGCCAATTGCCAGAGGACGTTTCATGGCGCCGCGGTGAAGCCACCTCCGCCAGAGTCGGTGGTGACGGGGAAGGAGGAGTACTACTGTTACCACGTGAGTCTGCCGCTTAGGTATCCTGTTGGTGAAAGGCGTAGTTTTGGTGATGAGGAGAATGGGATGCGGAAGAGGTTTAGGGTTAAAACAGTGGCTAATAGGACTAGAAGGAAAGGGTTTGTTCATGCCCATGTTGTTTCGGATTCGGACGGGGAGGAGAAAGACGGGGAAAGGTAG 801 0.5643 MKQKPDTDNHASSEGTGDSDTDSLLRPALSLLNRRTFTACRDFTRKIARSDPKASIQIDQILAVADVLAAAERRHDPLDWYSILRLNPGDAAADRDLVRQQFKTLVRLLDPNKNKFPFADEALMRVREAWRVLSDPILKASFDSRVQDAGSSFWTMCPYCWYLHEYQKCYEDCSLRCANCQRTFHGAAVKPPPPESVVTGKEEYYCYHVSLPLRYPVGERRSFGDEENGMRKRFRVKTVANRTRRKGFVHAHVVSDSDGEEKDGER* 267
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01979 266 MobiDBLite consensus disorder prediction 1 15 - -
Lapu3g01979 266 SMART dnaj_3 78 138 IPR001623 -
Lapu3g01979 266 SUPERFAMILY Chaperone J-domain 74 145 IPR036869 -
Lapu3g01979 266 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 17 224 - -
Lapu3g01979 266 Pfam DnaJ domain 79 143 IPR001623 -
Lapu3g01979 266 ProSiteProfiles dnaJ domain profile. 79 146 IPR001623 -
Lapu3g01979 266 CDD DnaJ 79 135 IPR001623 -
Lapu3g01979 266 MobiDBLite consensus disorder prediction 1 23 - -
Lapu3g01979 266 Gene3D DnaJ domain 78 151 IPR036869 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu3g01979 Lapu-Chr3 37446375 37447175 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01979 19 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.017 5.38e-43 148
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01979 - - var:108337473 445.662