Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01977 ATGGCCACCACCATCAATTCTGCTGGGGCATTCACCACAATCCAAGAGAGGGTCATTTTCGGGAAAGAGATCAAGAAAAGCAAGTTCATTGCCATTGCTGGCCCCATCCCCGATGAAAAATCAGCCATGTCTTCCCTTTCACAGGTCCGGGATCCACGTGCCACCCACAATTGCTGGGCTTATAAGAACATGAAGCTGCGGCTGCCAATCCTCCTCATTGCTCTGGTGTTGTGCACCCCATTTTCCACCTCTTCGAAGCCCAAGGACTTGTTCCTAGGAATAGCTCCTGAAGATGACAAGTATTACAGCGTTTCCGATGTTATAAGATGTAAAGATGGATCCGGAAAGTTCAACAAGACACAACTCAATGACGATTTTTGCGATTGCGCTGATGGAACTGATGAACCGGGTACATCGGCATGTCCTGGTGGAAGATTTTTTTGTCGGAATGCAGGACATTCTCCTGTTTACTTGTTTTCATCTAGAGTGAATGATGGAATTTGCGATTGCTGTGATGGAACTGACGAATATGATAGTCAAGTAAAGTGTCCAAATACCTGCTGGGAGGCTGGGAAAGTGGCTCGTGATAGACTGGAAAAAAAGATTTCAACTTATCTAGAGGGTGTCAAATTGCGAAAACAAGAAATTGAACAAGCTAAAGTAGCTATCGAGAAGGATGAGGCAGAACTTTCAAAATTAAAAAAGGAAGAAAGTATACTTAAAGAGATTGTAAAGCAGCTAAAGGATCATAAAGAACAAATAGAGAAGGCAGAGGAAAAAGAACGTTTACAGAAAGAAATGGAAGAGAAGCAGAAAAAGGAGTCTGAGGAGAAGGCTAATGAAGCAAAGGATGAAGTTGGTGAAGATATGGGTAATAGAAATAAAGATGGAAAGCATTCGGATGTAGAAGATAGTGATCTGGAAAATAACCATGATAAAATAGAAAATCCAGAGGGTTCTCCTGCAGTTCAGGATGAAGCAGGGGAGAAATTGGCAGATGTACTTGATAATGATGATGGTGACAGCGATAGTCCTGGAAGTGAAGGATCTTTGCTTAATAAAGTGGAAGAGAATGCAAAAGTAGCCAATGAAGAACCTATTGTTAAATCTGAAACTGATGTTAAGGTTGGAAACAAAGAGTCCTCAGATGAAAACATCAATAAGGGGAATGAAGTATCTGAAAATACCGAGGGATTATCAAGGGAAGAGTTGGGTCGGCTTGTTGCCTCACGTTGGACAGGAGAAAATACTGATACACCAAGTGCTGAAACTGATACTAAATTAGACAATGAAGATCGCAATGATCTTCCAAAGGAGACAAAAAATGACGAATATGAAGGCTATGCTTCTGAAACTGATGATGAGAGCAACAAATATGATGATGATGATGATGATGGCCGCAAATATGATGATGAAGATGATGTTGACGAGGAATATCAAGAGGAAGAGCATGATGACCTTAGTTCTTCCTACAAATCTGACTCTGATAATGAACTAGACTTGTCAGATAATCCTTCTTGGTTAGAGAAAATACAGAAAACTGTACGAAATATTTTTCAGGCTGTCAACTTATTCCAGGCTCCAGTGAATATGTCAGATGCTGCTCGTGTGCGCAAGGAATATGATGAATCAAGTGCCAAGTTGTCAAAAATACAGTCTAGAATATCAAGTCTGACGCAGAAGCTAAAACATGATTTTGGTCCAAAAAAGGAGTTTTATACATTCTATGATCATTGCTTTGAGGGCAAGGAGAACAAGTACACTTACAAAGTCTGCCCCTATAAACAAGCTTCTCAAGAGGAGGGCTATTCCACCACCCGTTTGGGGCGCTGGGACAAATTTGAGGATTCATATAAAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATAGGAGTTTGAAGGTCAAGCTAAGATGTGGGTTGAAAAATGAGATTACTGATGTAGATGAACCAAGTCGTTGCGAATATGTAGCTTTATTATCTACCCCAGCCCTTTGTCAAGAGGAAAAGCTAAAGGAGTTACAGCACAAGCTAGACTTATTGAAAGTGGAACAACCAGCAAACCATGATGAGTTGTGA 2091 0.4075 MATTINSAGAFTTIQERVIFGKEIKKSKFIAIAGPIPDEKSAMSSLSQVRDPRATHNCWAYKNMKLRLPILLIALVLCTPFSTSSKPKDLFLGIAPEDDKYYSVSDVIRCKDGSGKFNKTQLNDDFCDCADGTDEPGTSACPGGRFFCRNAGHSPVYLFSSRVNDGICDCCDGTDEYDSQVKCPNTCWEAGKVARDRLEKKISTYLEGVKLRKQEIEQAKVAIEKDEAELSKLKKEESILKEIVKQLKDHKEQIEKAEEKERLQKEMEEKQKKESEEKANEAKDEVGEDMGNRNKDGKHSDVEDSDLENNHDKIENPEGSPAVQDEAGEKLADVLDNDDGDSDSPGSEGSLLNKVEENAKVANEEPIVKSETDVKVGNKESSDENINKGNEVSENTEGLSREELGRLVASRWTGENTDTPSAETDTKLDNEDRNDLPKETKNDEYEGYASETDDESNKYDDDDDDGRKYDDEDDVDEEYQEEEHDDLSSSYKSDSDNELDLSDNPSWLEKIQKTVRNIFQAVNLFQAPVNMSDAARVRKEYDESSAKLSKIQSRISSLTQKLKHDFGPKKEFYTFYDHCFEGKENKYTYKVCPYKQASQEEGYSTTRLGRWDKFEDSYKVMVFSNGDKCWNGPDRSLKVKLRCGLKNEITDVDEPSRCEYVALLSTPALCQEEKLKELQHKLDLLKVEQPANHDEL* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01977 696 Coils Coil 668 688 - -
Lapu3g01977 696 Coils Coil 206 285 - -
Lapu3g01977 696 Pfam Glucosidase II beta subunit-like 88 236 IPR028146 -
Lapu3g01977 696 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 71 696 IPR039794 -
Lapu3g01977 696 Gene3D - 11 102 IPR036956 -
Lapu3g01977 696 ProSiteProfiles MRH domain profile. 577 672 IPR044865 -
Lapu3g01977 696 MobiDBLite consensus disorder prediction 422 454 - -
Lapu3g01977 696 MobiDBLite consensus disorder prediction 260 500 - -
Lapu3g01977 696 SUPERFAMILY Mannose 6-phosphate receptor domain 577 670 IPR009011 -
Lapu3g01977 696 Coils Coil 534 554 - -
Lapu3g01977 696 MobiDBLite consensus disorder prediction 358 387 - -
Lapu3g01977 696 SUPERFAMILY Ribosomal protein S5 domain 2-like 13 62 IPR020568 -
Lapu3g01977 696 Pfam Glucosidase II beta subunit-like protein 538 693 IPR036607 -
Lapu3g01977 696 MobiDBLite consensus disorder prediction 455 484 - -
Lapu3g01977 696 MobiDBLite consensus disorder prediction 485 499 - -
Lapu3g01977 696 Gene3D - 572 670 IPR009011 -
Lapu3g01977 696 MobiDBLite consensus disorder prediction 260 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01977 Lapu-Chr3 37414072 37430523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01977 82 696 Calmodulin-binding Proteins AT5G56360 58.254 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01977 K08288 - gmx:100807083 983.4