Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01975 ATGGAAGAGAGCATTGACCCTGCAACCTCAAGCCTTCTGTGTCTGGAAAACAATGACATGTGCTTTGATGATTTTGAATGTAATGTTGCAGATGAGTCTCCTTCCTGGGACCACAAAAATCCTAATCGTAACAATCAATGTCTGATTGAGGACAATCTTAGATCGGAACATGTATTGGATTCTCCTGTACTGAGTGATGAAATTGTTTTGGGTTTAGTTGGGAAGGAGAGGGAACATTTGCCCCGGGATGATTACCTCGAGAGGCTGCTTGGTGGGGACTTGGACTTGAGTGTTAGGAGGCAGGCTCTTGATTGGATTTGGAAGGCTCATGCACACTATGATTTTGGACCCTCTAGCTTATGTCTATCTGTGAATTACTTGGATCGGTTCCTATCAGTATATGAATTACCAGGAGGCAACAGTTGGAGTGCACAACTATTAGCTGTGGCATGTTTGTCAATTGCTACTAAAATGGATGAGATTAAAGTGCCCTCTTGTGTAGATATACAGGTTGGAGAACCAAAGTTTCTATTTGAAGCTAAAACCATTCAAAGAATGGAACTACTGGTATTAAGCACATTGAAATGGAAAATGCAAGCTTTAACTCCGGTTTCCTTTTTAGACTACTTCCTCAAGAAGATCACCTGTGACCAACTTCTTGTAAAGTCATCCATTTTGAGATCAGTTCGGCTCATCCTTGACATAATTAGATGTATCAATTTCTTGGAATTCAAACCTTCTGAAATTGCCGCAGCGGTGGCAATTTCTGTGTCAAGAAAATTGCAAGCAGAAGAGATTGACGAATCCTTAACATGTTTTGTCATTGTAGGAAAGGAAAGAATTTTGAAGTGTCTTGAATTGATTAGAGATTTGCCCTTGATCCAAGCTTCTACTAATTTCGATAACAACTTAGCACCATTGGTACCTCAAAGTCCTATTGGGGTGTTGGATGCTGCATGCTTGATCTCTATAAGTGATGAATTAACAGTTGGATTATCTACGGATTATTCACTTAATACTCCAGATTTTAAGAGGATGAAATCTTCTGACCCTCTTGATGGGACTTTCAAGTCATGA 1077 0.3993 MEESIDPATSSLLCLENNDMCFDDFECNVADESPSWDHKNPNRNNQCLIEDNLRSEHVLDSPVLSDEIVLGLVGKEREHLPRDDYLERLLGGDLDLSVRRQALDWIWKAHAHYDFGPSSLCLSVNYLDRFLSVYELPGGNSWSAQLLAVACLSIATKMDEIKVPSCVDIQVGEPKFLFEAKTIQRMELLVLSTLKWKMQALTPVSFLDYFLKKITCDQLLVKSSILRSVRLILDIIRCINFLEFKPSEIAAAVAISVSRKLQAEEIDESLTCFVIVGKERILKCLELIRDLPLIQASTNFDNNLAPLVPQSPIGVLDAACLISISDELTVGLSTDYSLNTPDFKRMKSSDPLDGTFKS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01975 358 Gene3D - 82 199 - -
Lapu3g01975 358 FunFam D6-type cyclin 195 286 - -
Lapu3g01975 358 CDD CYCLIN_AtCycD-like_rpt2 202 288 - -
Lapu3g01975 358 CDD CYCLIN_AtCycD-like_rpt1 98 196 - -
Lapu3g01975 358 SMART Cyclin_C_2 201 324 IPR004367 -
Lapu3g01975 358 Gene3D - 72 286 - -
Lapu3g01975 358 SUPERFAMILY Cyclin-like 183 291 IPR036915 -
Lapu3g01975 358 FunFam D2/4-type cyclin 82 194 - -
Lapu3g01975 358 SUPERFAMILY Cyclin-like 58 198 IPR036915 -
Lapu3g01975 358 Pfam Cyclin, N-terminal domain 73 198 IPR006671 -
Lapu3g01975 358 SMART cyclin_7 104 192 IPR013763 -
Lapu3g01975 358 Pfam Cyclin, C-terminal domain 202 292 IPR004367 -
Lapu3g01975 358 PANTHER CYCLINS 66 289 IPR039361 -
Lapu3g01975 358 ProSitePatterns Cyclins signature. 99 130 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01975 Lapu-Chr3 37354502 37357189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01975 65 269 Core Cell Cycle Gene Families AT5G65420 56.522 1.72e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01975 K18810 - gmx:100800570 506.138