Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01957 ATGGCTTCTTTCACTCGCCTTCTTCCATTTCTTTTCCCTATGCTCACAACTTCATTTGTTACAGTTTTTGCCTTTGAGGTCTCACTCCAAGCCACTAATTTCTCTCCTTTAAATTGCTCTGCTAAGATCACAGCATGTAATGCCTCACTCTACCACATATCCCAGAATCTCACCATTCAGCAAATTGCCTCTTTTTACTCGGTTACTTCTTCCCAGATCACACCTATAATGCATGCCACCAAACAGGATTACCTCATCACAGTACCTTGTTCATGCAAACATACAAGTGACCTTAGCGGATATTTCTATGACACTACCTACAAAGTCAGGCCACATGACACTTTTCTGAATATTTCAAACCTGATTTTCAGTGGCCAAGTTTGGCCAGTTAATGGCACATTTCACCCAGAAGAGAATTTAGCAATACACATTCCATGTGGGTGCTCAGAAAGTGACTCTCAAATAGTTGTCACCTATACTGTTCAGCCAAATGATACACCAACAGTGATTGCTAATCTGCTAAATGCTTCATTGGCTGACATGCTGAGCATGAACAAGGTTCTGCCTCCGAACTTTGAATTCATAGATGTTGGTTGGGTGCTATTTGTTCCCAAGGGATCCAAAGGGCTATTACCTAGTAGTGCTGCTGACAGTGAAGAAAACAAACTTCAGTGGACAACAACAATAATGGGTATCTTAGCGGGAGTGACATTCATTTCAGTTATTACAACCATCATTCTCATTGTCAGGAGAAATAAAGTGAATCAAATGAGAAGCGAAGATTCACGCCTTATCACTAGAAGATCAATTGCCAATAGAACTATTTCCTCAAAGTATAACTTTCAAAAGGAATATATAGAAGATGTAATTTCAATGGAATCAGAAAGACCAATAGTATATAACCTTGAGGAGATTGAAGAGGCTACGAATAACTTTGATGAAAATCGAAGAATAGGAAGTGGTGGATATGGAAGTGTCTATTTTGGAGTTTTAGGGAGCAAGGAGGTTGCTGTGAAGAAAATGAGGTCTAATAAATCTAAGGAGTTCTATGCAGAACTCAAGGTCTTATGTAAGATCCACCATATCAACATTGTGGAGCTGTTGGGATATGCCAACGGAGAAGATGACCTCTATTTGGTGTATGAGTACGTTCCAAATGGATCTCTTAGTGATCATCTTCATGACCCATTACTCAAAGGGAACCAGCCTCTTTCTTGGAGTGTGAGGGTTCAAATTGCACTAGATGCTGCAAAAGGTCTTGAATATATACATGACTATACAAAAGCAAGATATGTGCACCGTGACATAAAGAGTAGCAATATTCTACTTAATGAAAAGTTCAGAGCAAAGGTGGGAGATTTTGGACTCGCAAAGCTGGTAGATCGAACCGATGATGAAAATTTTATAGCAACCAGGCTTGTAGGAACACCAGGCTACCTTCCACCAGAGTAA 1452 0.3988 MASFTRLLPFLFPMLTTSFVTVFAFEVSLQATNFSPLNCSAKITACNASLYHISQNLTIQQIASFYSVTSSQITPIMHATKQDYLITVPCSCKHTSDLSGYFYDTTYKVRPHDTFLNISNLIFSGQVWPVNGTFHPEENLAIHIPCGCSESDSQIVVTYTVQPNDTPTVIANLLNASLADMLSMNKVLPPNFEFIDVGWVLFVPKGSKGLLPSSAADSEENKLQWTTTIMGILAGVTFISVITTIILIVRRNKVNQMRSEDSRLITRRSIANRTISSKYNFQKEYIEDVISMESERPIVYNLEEIEEATNNFDENRRIGSGGYGSVYFGVLGSKEVAVKKMRSNKSKEFYAELKVLCKIHHINIVELLGYANGEDDLYLVYEYVPNGSLSDHLHDPLLKGNQPLSWSVRVQIALDAAKGLEYIHDYTKARYVHRDIKSSNILLNEKFRAKVGDFGLAKLVDRTDDENFIATRLVGTPGYLPPE* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01957 483 SMART serkin_6 312 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01957 483 CDD LysM 157 203 IPR018392 -
Lapu3g01957 483 SUPERFAMILY LysM domain 157 204 IPR036779 -
Lapu3g01957 483 Pfam LysM domain 159 204 IPR018392 -
Lapu3g01957 483 ProSiteProfiles LysM domain profile. 157 203 IPR018392 -
Lapu3g01957 483 Gene3D Phosphorylase Kinase; domain 1 290 383 - -
Lapu3g01957 483 FunFam Kinase family protein 288 383 - -
Lapu3g01957 483 Gene3D LysM domain 150 210 IPR036779 -
Lapu3g01957 483 Pfam Protein kinase domain 313 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01957 483 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Lapu3g01957 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Lapu3g01957 483 SUPERFAMILY Protein kinase-like (PK-like) 294 483 IPR011009 -
Lapu3g01957 483 ProSiteProfiles Protein kinase domain profile. 312 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01957 483 Gene3D Transferase(Phosphotransferase) domain 1 384 483 - -
Lapu3g01957 483 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 33 483 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01957 Lapu-Chr3 36716598 36721188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01957 293 483 Receptor kinase-like Gene Family AT1G51940 61.780 7.58e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu3g01957 Pkinase 2.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01957 - - gmx:100791718 789.645