Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01951 ATGGAAGTAGAACTCCCAGCTGCAGCTGTGAATGAATCTCAGCAATCAAAGTTTGCTCTACCTGTGGATTCTGAACACAAGGCCACTGAGTTCAGATTATTTTCCATAGCTAAACCCCACATGAGGTCTTTTCACCTATCATGGGTCTCTTTCTTCTCGTGCTTTGTGTCTAGCTTTGCTGCTCCGCCCCTCCTTCCCATAATCCGTGACAACCTGAACCTCACAGCCACTGACATTGGAAATGCTGGTGTTGCATCAGTTTCCGGTGCAGTTTTAGCAAGAATTGCAATGGGAACAGCTTGTGACTTAGTTGGACCACGCCTGGCCTCTGCATCACTCATTCTCCTCACAGCACCATTTGTGTACTTCACTTCCATCATCAACTCTGCCACTTCTTACCTCCTTGTCCGTTTCTTCACTGGCTTCTCCCTAGCCACCTTTGTCTCCACACAGTTCTGGATGAGCTCTATGTTCTCTGCTCCGGTCGTCGGTTCGGCAAACGGATTAGCGGGTGGATGGGGCAACCTTGGAGGAGGAGCCACCCAACTCATCATGCCCCTTGTGTTCTCCCTCATCCGTGACATTGGTGCTACCAAATTCACAGCATGGAGGATTGCATTCTTTGTCCCTGCCATGTTCCAAATGCTCACGGCATTTTCAATCCTGATATTTGGCCAGGACATGCCTGATGGGAACTTCCACCGCTTGAAGAAGTCAGGGGACAAAGCAAAAGACAAATTGTCAAGAGTTGTGTATCATGGGATTACTAACTACAGAGGTTGGATTCTGGCGTTGACTTATGGCTACTGCTTTGGGGTGGAGTTGACCATAGACAACATCATAGCTGAATATTTCTATGACAGGTTTAATCTGAAACTCCACACTGCTGGAATCATTGCTGCAAGCTTTGGCTTGGCTAACTTATTTTCTAGACCTGGTGGGGGTTATATATCAGATGTAATGGGAAAGAGGTTTGGCATGAGAGGGAGATTGTGGGCTTTATGGCTATGCCAAACCTTGGCTGGTGTCTTCTGCATCATCCTTGGCCTTGTGGGATCTTTAAGTGTATCCGTCGTTGTTATGATCATATTCTCTGTGTTTGTCCAAGCCGCATGTGGAATGACCTTTGGGATCGTTCCCTTTGTCTCAAGAAGGTCATTAGGGGTCATATCTGGAATGACTGGAGGAGGAGGTAATGTGGGTGCAGTGGTGACCCAGCTAATTTTCTTCAAAGGATCCAAGTTTTCAAAAGAAAGAGGAATAACTCTAATGGGAATCATGATCATAATATGCTCCCTGCCAATATGTCTAATCTATTTTCCACAATGGGGTGGGATGTTTTCTGGTCCCTCATCTAAGAAGGTCACAGAAGAAGATTACTACTTAGCTGAGTGGAACTCGAAGGAGAAGGAGAAAGGCTCCCATCATGCAAGCTTGAAATTTGCTGATAACAGCAGAAGTGAAAGAGGCAAAAAACTGAATACATCAACCGAGCCTTCTGAGGAGATCACACCCCCACATGTTTGA 1527 0.4623 MEVELPAAAVNESQQSKFALPVDSEHKATEFRLFSIAKPHMRSFHLSWVSFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVLARIAMGTACDLVGPRLASASLILLTAPFVYFTSIINSATSYLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGLAGGWGNLGGGATQLIMPLVFSLIRDIGATKFTAWRIAFFVPAMFQMLTAFSILIFGQDMPDGNFHRLKKSGDKAKDKLSRVVYHGITNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANLFSRPGGGYISDVMGKRFGMRGRLWALWLCQTLAGVFCIILGLVGSLSVSVVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSKFSKERGITLMGIMIIICSLPICLIYFPQWGGMFSGPSSKKVTEEDYYLAEWNSKEKEKGSHHASLKFADNSRSERGKKLNTSTEPSEEITPPHV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01951 508 MobiDBLite consensus disorder prediction 468 508 - -
Lapu3g01951 508 Pfam Major Facilitator Superfamily 49 404 IPR011701 GO:0022857|GO:0055085
Lapu3g01951 508 CDD MFS_NRT2_like 44 437 IPR044772 GO:0015112
Lapu3g01951 508 Gene3D MFS general substrate transporter like domains 243 444 IPR036259 -
Lapu3g01951 508 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 11 492 IPR044772 GO:0015112
Lapu3g01951 508 MobiDBLite consensus disorder prediction 468 496 - -
Lapu3g01951 508 FunFam High affinity nitrate transporter 2.5 36 232 - -
Lapu3g01951 508 Gene3D MFS general substrate transporter like domains 36 233 IPR036259 -
Lapu3g01951 508 SUPERFAMILY MFS general substrate transporter 34 441 IPR036259 -
Lapu3g01951 508 FunFam Nitrate transporter 2.1 244 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01951 Lapu-Chr3 36569680 36571786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01951 1 500 Inorganic Solute Cotransporters AT1G12940 72.962 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01951 K02575 - gmx:100787888 898.271