Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01950 ATGATTCCTGTTTCTGTTTCCTTTCTGCTTCACTTCCTTTTTGTGTTCGTTCCTTGTACACTTTCCGACCCAAGAGCACAGAGAGCCGCTCTGCTCTGCACCAACCGCACAGTTTCGTCTCTGTCTGGGCGCCAAGTTTTCATCGCAAACTTTCTGGCGGCGATGGATGCCTTGACCCCTCTGACGACTACTCGGCGGAACGGAGCCGTGACCGAGGGGTCCGGAAATACCACCGTTTACGCCATGGGTGAGTGCATGAAGGACCTCTCGCAGTCGGACTGCAACGTCTGCCTGGCGCAGTGCAAGACGCAGCTTCTCTCGTGCCTCCCGTTCCAGAAAGGGACACGTGGTGGCAGGTTGTTCTTCGACGGTTGCTACCTCCGCTACGATGACTACAACTTTTTCGCCGAGAGTTTCGGCGACCAAGACACCACTGTGTGCGGCACTGGTGGGAGTAGTAACAATAATAATAGTGAAGGTGTTAACAGTACTGGTATTTATAAGGCTAACGCTTTGGAGTTGGTTAGGAACCTGAGCGAGGTGGCGCCCAAAAACAATGGGTTTTTGGTGGGGTCGGTGGAGAGAAAGAACGTGAGTGTTTACGGGTTGGCTCAGTGCTGGGAGTCCGTGAACGGTAGTGCCTGCAAGAAATGCTTGGCGGATGCTGCTACGGGGATTGCTTCGTGTGCAACACAGGAAGGGAGGGCATTGAATGCAGGTTGTTACTTGAGGTACTCTGCACACAAGTTTTATAACAATTCAACCGATGTTGCAATATCTGGAAATCATGGACAACGGAGTCTATCTAAAATTCTGGCTGCGTCCACTGCTGCCCTGGCTCTTTTGATGGTTGTTACGACAGTTGTTTTCTTTACAAGGAAGAAGATGGTGACAAGAAGAAGAGAAAGAAGACAGTTTGGTGTTCTTCTCGACAGAGTGAACAAGTCCAAGCTAAATATGCCTTATGAGATTCTTGAAAAGGCAACAGATTACTTCAACGATTCCAACAAGCTAGGACAAGGGGGGTCAGGTTCTGTTTATAAAGGAGTTATGCCGGATGGAATTACTGTTGCCATAAAAAGGCTAAGATTTAACACAACACAATGGGTGGATCATTTCTTCAATGAGGTCAATTTGATAAGTGGCATTCAACACAAAAATCTAGTAAAACTTTTAGGATGCAGTATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCTAACCAGAGCCTCCATGATCACCTTTCTGTTAGAAGGATTTCTCAACCTCTGAATTGGGAATTCAGGCATAAGATTATATTAGGAATTGCAGAGGGCTTGGCCTACCTTCACGAGGAATCACATGTAAGAATCATTCATAGAGACATAAAATTGAGCAATATTCTACTTGAGGAGGACTTCACACCAAAGATTGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGATAAGTCTCACATTAGCACAGCCATTGCGGGCACGCTGGGGTATATGGCTCCAGAGTACGTTATTCGTGGGAAGTTGTCTGAGAAAGCAGATGTTTACAGTTTTGGAGTTCTAGTTATCGAAATTGTATCTGGCAAAAGAAACAGTTCCTTTATTATGAATTCATCCTCTCTCCTACAAACGGTTTGGAGCCTCTATGGATCAAATAGGTTATGTGAAGTTGTTGATCCGACCCTAGAGGGTCCTTTTCCTGCAGAGGAAGCATGCCAACTGCTTCAGATAGGGCTGCTTTGTGCGCAAGCTTCTGCAGAGTTGAGACCATCAATGTCAATAGTAGTTAAAATGATTAATCACAATCACGAAATTCCTCAGCCAACCCAACCGCCATTTATTAATTCTGCTAGTTCAGAACTCAGCAGATCTGGTTTACCTGGATATAATTTTCAGCCTGGATCCAACACTCAGTCTTCAGCAAACACCGTGACTGAAAGTCAGATTGAACCTAGATGA 1962 0.4551 MIPVSVSFLLHFLFVFVPCTLSDPRAQRAALLCTNRTVSSLSGRQVFIANFLAAMDALTPLTTTRRNGAVTEGSGNTTVYAMGECMKDLSQSDCNVCLAQCKTQLLSCLPFQKGTRGGRLFFDGCYLRYDDYNFFAESFGDQDTTVCGTGGSSNNNNSEGVNSTGIYKANALELVRNLSEVAPKNNGFLVGSVERKNVSVYGLAQCWESVNGSACKKCLADAATGIASCATQEGRALNAGCYLRYSAHKFYNNSTDVAISGNHGQRSLSKILAASTAALALLMVVTTVVFFTRKKMVTRRRERRQFGVLLDRVNKSKLNMPYEILEKATDYFNDSNKLGQGGSGSVYKGVMPDGITVAIKRLRFNTTQWVDHFFNEVNLISGIQHKNLVKLLGCSITGPESLLVYEYVPNQSLHDHLSVRRISQPLNWEFRHKIILGIAEGLAYLHEESHVRIIHRDIKLSNILLEEDFTPKIADFGLARLFPEDKSHISTAIAGTLGYMAPEYVIRGKLSEKADVYSFGVLVIEIVSGKRNSSFIMNSSSLLQTVWSLYGSNRLCEVVDPTLEGPFPAEEACQLLQIGLLCAQASAELRPSMSIVVKMINHNHEIPQPTQPPFINSASSELSRSGLPGYNFQPGSNTQSSANTVTESQIEPR* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01950 653 ProSiteProfiles Gnk2-homologous domain profile. 149 250 IPR002902 -
Lapu3g01950 653 Pfam Protein kinase domain 333 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01950 653 MobiDBLite consensus disorder prediction 607 653 - -
Lapu3g01950 653 SUPERFAMILY Protein kinase-like (PK-like) 318 622 IPR011009 -
Lapu3g01950 653 FunFam Cysteine-rich receptor-like protein kinase 2 298 407 - -
Lapu3g01950 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Lapu3g01950 653 Gene3D - 151 250 IPR038408 -
Lapu3g01950 653 Gene3D - 27 134 IPR038408 -
Lapu3g01950 653 CDD STKc_IRAK 338 601 - -
Lapu3g01950 653 Pfam Salt stress response/antifungal 33 132 IPR002902 -
Lapu3g01950 653 Pfam Salt stress response/antifungal 158 247 IPR002902 -
Lapu3g01950 653 ProSiteProfiles Gnk2-homologous domain profile. 26 134 IPR002902 -
Lapu3g01950 653 Gene3D Phosphorylase Kinase; domain 1 292 407 - -
Lapu3g01950 653 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Lapu3g01950 653 FunFam Cysteine-rich receptor-like protein kinase 2 408 608 - -
Lapu3g01950 653 ProSiteProfiles Protein kinase domain profile. 332 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01950 653 Gene3D Transferase(Phosphotransferase) domain 1 408 611 - -
Lapu3g01950 653 FunFam Cysteine-rich receptor-like protein kinase 3 143 250 - -
Lapu3g01950 653 SMART serkin_6 332 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01950 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 80 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01950 Lapu-Chr3 36512018 36527643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01950 20 497 Receptor kinase-like Gene Family AT1G70530 60.125 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu3g01950 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01950 - - gmx:100305402 1036.94