Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01913 ATGGCTTCTCCACTCAGAATCTCAAGGCTCATCTCTCGCTCCTTCTCTTCAACTTCTTTCTTTTCCCGAGGTGGTAATGGTTACCATGGCTCGAGACTCTGTAAATACAGCACTGCTACTGCCATTGAAGAACCCATTAAACCAGCAGTGCAAGTGGAACACACCCAACTCTTAATTGATGGAAAATTCGTAGATGCTGCTTCTGGTAGAACTTTTCCATCTTTGGATCCAAGGACGGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATCGAGCTGTTGCAGCTGCGCGCAAAGCATTTGATCATGGTCCATGGCCTAAGATGGCAGCTTATGAAAGGCAAAGGATCTTGTTACGTGCAGCTGATCTGATTGAAAAGCATAATGATGAGATTGCTGCACTTGAGACTTGGGATAATGGAAAGCCTTATGAACAATCTGCTAAGATTGAGATTCCAATGCTTGTTCGTCTGATTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTAACGGTTCCAGCTGATGGACCTTATCACGTGCAAACTTTGCATGAACCCATTGGTGTTGCGGGTCAGATAATTCCTTGGAACTTCCCTCTTCTCATGTTTGCCTGGAAGGTTGGTCCAGCATTGGCCTGTGGTAACACCATTGTTCTCAAAACAGCTGAGCAGACACCATTATCTGCTTTATATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTCCAGGTGTTTTAAATGTGGTATCAGGATTTGGCCCGACTGCTGGTGCTGCTCTTGCAAGTCACATGGAGGTTGATAAGCTTGCTTTTACTGGTTCCACTGATACTGGGAAAGTTGTCCTTGAATTGGCGGCTAAAAGCAATCTTAAACCTGTAACTTTGGAGCTTGGTGGGAAATCCCCGTTTATTGTGTGTGAAGATGCTGACGTAGATCAGGCTGTTGAGCTAGCACACTTTGCTTTATTCTTTAATCAGGGACAATGCTGCTGTGCTGGCTCACGAACATACGTACATGAAAGTGTATACGATGAGTTTGTCGAGAAAGCAAAGGCTCGTGCTTTGAAACGTGTTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAGCAATTTGAGAAAATTCTGAGGTATATCAAATATGGTGTTGAAAGTGGGGCTACCCTTGAAACCGGAGGAGACAGACTTGGCAACAAGGGCTACTATATTCAACCTACTGTCTTCTCAAATGTTAAGGATGACATGCGGATTGCAAAGGATGAAATCTTTGGTCCAGTCCAATCCATATTAAAATTCAAGGACCTTGGTGAGGTAGTTCAAAGAGCAAATAACACACGTTATGGGCTTGCAGCAGGAGTGTTCACTAAGAACATAGACACTGCCAACATTTTGACTCGGGCACTGAGAGTTGGAACAGTTTGGATCAATTGCTTTGACACATTTGATGCTGCAATTCCCTTTGGTGGTTACAAGATGAGTGGCCAGGGCAGAGAAAAAGGAGAGTATAGTCTTAAGAACTACTTGCAAGTGAAGGCTGTTGTTAACCCCTTGAAGAACCCAGCATGGCTTTGA 1608 0.4447 MASPLRISRLISRSFSSTSFFSRGGNGYHGSRLCKYSTATAIEEPIKPAVQVEHTQLLIDGKFVDAASGRTFPSLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDHGPWPKMAAYERQRILLRAADLIEKHNDEIAALETWDNGKPYEQSAKIEIPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPPGVLNVVSGFGPTAGAALASHMEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTYVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSEQFEKILRYIKYGVESGATLETGGDRLGNKGYYIQPTVFSNVKDDMRIAKDEIFGPVQSILKFKDLGEVVQRANNTRYGLAAGVFTKNIDTANILTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVNPLKNPAWL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01913 535 CDD ALDH_F2BC 52 526 - -
Lapu3g01913 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 41 525 - -
Lapu3g01913 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Lapu3g01913 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Lapu3g01913 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620
Lapu3g01913 535 Pfam Aldehyde dehydrogenase family 63 525 IPR015590 GO:0016491
Lapu3g01913 535 FunFam Aldehyde dehydrogenase, putative 497 523 - -
Lapu3g01913 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 523 IPR016162 GO:0016491
Lapu3g01913 535 SUPERFAMILY ALDH-like 50 528 IPR016161 GO:0016491
Lapu3g01913 535 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 59 319 - -
Lapu3g01913 535 FunFam Mitochondrial aldehyde dehydrogenase 2 307 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01913 Lapu-Chr3 35065012 35068635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01913 6 535 Aldehyde Dehydrogenase Gene Family AT3G48000 78.277 0.0 887