Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01908 ATGAAGACTTTCAAATACCAAGCGTTGGAAGAAATCGGTCGAGGCAAATTCGCCACCGTCTTCCGCTGCTTCCACCCATCATCCAACCAATTCTACGCTCTCAAACTCATCAACAACCACCTCCTCACCGACGCCACCGACCGCCACTGCCTTGAAATGGAGGCCAAAGTCATGACCTTCCTCTCTCCCCACCCCAACATTCTTAAAATCGTCGACGCCTTCCAGGACGCCCAAACCTCCATCATCGTTCTCCAGCTCCGCCGACCCGCACCCTCTTCGACCGCATCGCCGACGGCCCTTCCGGAGCCCCACGCCGCTCCCTCCTCAGCGGCTTCTCGAAGCTCTCACGCACTTGCCACGCGCTCGGACTCGCCCACGAGACGTCAAACCCGAAAACCTCCTGTTCGACGAAGGCAACAACCTTAA 426 0.5775 MKTFKYQALEEIGRGKFATVFRCFHPSSNQFYALKLINNHLLTDATDRHCLEMEAKVMTFLSPHPNILKIVDAFQDAQTSIIVLQLRRPAPSSTASPTALPEPHAAPSSAASRSSHALATRSDSPTRRQTRKPPVRRRQQP* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01908 141 Pfam Protein kinase domain 6 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01908 141 Gene3D Phosphorylase Kinase; domain 1 2 87 - -
Lapu3g01908 141 SUPERFAMILY Protein kinase-like (PK-like) 5 86 IPR011009 -
Lapu3g01908 141 ProSiteProfiles Protein kinase domain profile. 6 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01908 141 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 86 - -
Lapu3g01908 141 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Lapu3g01908 141 MobiDBLite consensus disorder prediction 108 124 - -
Lapu3g01908 141 MobiDBLite consensus disorder prediction 91 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01908 Lapu-Chr3 34795699 34797589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01908 5 86 EF-hand Containing Proteins AT1G61950 35.366 3.35e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lapu3g01908 Pkinase 3.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01908 - K08794 lja:Lj0g3v0202739.1 114.39