Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01901 ATGGGTTACAAGGACATGACAAAGGTGAAGTGGGGGAAGAGGAGGAGGAGGCAAGAGGGTGTGGACAGGAGGATGAAGAAGCTGCAGCGGCTGGTTCCCGGCGGCGCCGGAATGAACCCGGACCGGCTTTTCCTTAAGACGGCGGAGCACATCTTGCAATTGAGGGTCCAACTCAATGTGTTGCAAGCTCTTTCCAAGGTTTTCAATGCTTGA 213 0.5446 MGYKDMTKVKWGKRRRRQEGVDRRMKKLQRLVPGGAGMNPDRLFLKTAEHILQLRVQLNVLQALSKVFNA* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01901 70 CDD bHLH_AtIBH1_like 13 64 IPR044549 GO:0006355
Lapu3g01901 70 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 66 IPR036638 GO:0046983
Lapu3g01901 70 MobiDBLite consensus disorder prediction 1 22 - -
Lapu3g01901 70 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 68 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01901 6 64 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43060 38.462 1.64e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01901 - - pvu:PHAVU_003G053700g 132.494