Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01881 ATGCTGTCATCATCATCGATATTAACCGCCACCACCTGCTCCTGCAACAGGAACAACCTGAACCACCACAAGTCCCTTTCTTCTTCCATACCTTCATTCTTCTCACGCCAGACCCTGAGAAGCAACAACACTGGCAGCAACAAAGCTATGGAAGATGTATGGGACGGCATCAACCTCACTTCCTTAAGCGACCACAACACCAACACTACCCACACCTCCAAAGGTGCAAAATTTCAAGACTTTCTAGCTCGACCCTTCAACACCTTCACTGTTGACCCATCTCCTGTGACTACTCTCACCTTGAGCACGCGTTCTGAGTGCCCTCCCCCGCACAAGGACCTGCAATCGGTGCAAACTGCTTCAAAGGCCGAACCTTTTGCCAACCCATTTTCCAATAAAAGAGCTCCACCAGGTTCGAGGGACTTGCGCGACGCGCGACTCATGAAGAATCGCGAATCTGCTGCCCGATCCAGAGCCAGAAAGCAGGAAAACATCGCTTACTTGTTTGAGTTGAAGCAAAAAATCAAGCAGTTGCAAGAAGAGAATGCGAGACTCAGAAGACAGCAGCAACTGGTTCCTTTCTTTCTCTTGTCGCTTTGGGTTATTGGTTTTTTCCGTACACTGCATGTTTTCCCGTTTTCTTGGCCATTGTCTGTTGATCGGAAAACTCGTGGGAGGTGA 681 0.4905 MLSSSSILTATTCSCNRNNLNHHKSLSSSIPSFFSRQTLRSNNTGSNKAMEDVWDGINLTSLSDHNTNTTHTSKGAKFQDFLARPFNTFTVDPSPVTTLTLSTRSECPPPHKDLQSVQTASKAEPFANPFSNKRAPPGSRDLRDARLMKNRESAARSRARKQENIAYLFELKQKIKQLQEENARLRRQQQLVPFFLLSLWVIGFFRTLHVFPFSWPLSVDRKTRGR* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01881 226 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 189 IPR043452 GO:0003700|GO:0045893
Lapu3g01881 226 Pfam bZIP transcription factor 143 187 IPR004827 GO:0003700|GO:0006355
Lapu3g01881 226 SUPERFAMILY Leucine zipper domain 144 192 IPR046347 GO:0003700|GO:0006355
Lapu3g01881 226 CDD bZIP_plant_BZIP46 146 189 - -
Lapu3g01881 226 Gene3D - 143 193 - -
Lapu3g01881 226 Coils Coil 168 191 - -
Lapu3g01881 226 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 146 160 IPR004827 GO:0003700|GO:0006355
Lapu3g01881 226 SMART brlzneu 139 198 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01881 Lapu-Chr3 33921578 33922368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01881 143 191 bZIP Transcription Factor Family AT3G56850 59.184 2.24e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu3g01881 bZIP_1 2.9e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01881 K14432 - vum:124837213 206.453