Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01867 ATGAGAATTGAGAAAAGAGGGGATAAAAAGAACCAGGGAAAGAGAAGCGAGGTTGTAGGTGGTGGAAGGTTTGGGAAGCCTATTCTTAAAGCTGATAATGCTTACCACAAGTTTACAGTGAAGAGGAACCACTGGTCTATGGCATGGGGTGCAACTATGAACCCATTTAAGCATCCTCATGGAGAAGGTAACCACCAAAAATTTGGGCATGCTAGTACTATCGAGTACGATACTCCCTTTGGCAAGAAACTTGGCCTCTTCATTTCCAAGAGGACTAGACTTCTTCGATATGAAGGAGCTTTGCAAGAGCATTACCCCTAA 321 0.4361 MRIEKRGDKKNQGKRSEVVGGGRFGKPILKADNAYHKFTVKRNHWSMAWGATMNPFKHPHGEGNHQKFGHASTIEYDTPFGKKLGLFISKRTRLLRYEGALQEHYP* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01867 106 SUPERFAMILY Translation proteins SH3-like domain 18 93 IPR008991 -
Lapu3g01867 106 PANTHER RIBOSOMAL PROTEIN L2 18 96 IPR002171 GO:0003735|GO:0005840|GO:0006412
Lapu3g01867 106 Gene3D Ribosomal protein L2, domain 3 19 95 IPR014726 -
Lapu3g01867 106 MobiDBLite consensus disorder prediction 1 16 - -
Lapu3g01867 106 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01867 Lapu-Chr3 33630756 33631524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01867 17 100 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 58.333 4.87e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01867 K02938 - pop:18099210 107.071