Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01862 ATGGGTGTGTCGCAAAAATGGTTCAGTATTTTTCGAGGGAGATTCATCAGATCATCCAAAAAAGACATCATTCTCCACCGCACAACAAGTGTTTGCACTAACGAATGCGAAGAAGCCACACTTAGTAGGAATGAAGTTGAAGACTTCATGATCAGTTTCCCTACAACACCAACACCAATTTCTTCAATCACCAAGGAAGATGTTGCGGCCATTAAGATCCAAGCTTATCTCAGGGGACATCTAGCCAGAAGAGCATATAAGGCATTAAAAGGTGTGGTGAAGGTGCAAGCTTTGGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGCACTTGTCCGATTGCAGGTCAGGATTCGTTCAAGGCAGCTACTTGGGAGCTTTGATAAGGAACCAACCACTTACTGA 426 0.446 MGVSQKWFSIFRGRFIRSSKKDIILHRTTSVCTNECEEATLSRNEVEDFMISFPTTPTPISSITKEDVAAIKIQAYLRGHLARRAYKALKGVVKVQALVRGVWVRKQSRIAMQCMHALVRLQVRIRSRQLLGSFDKEPTTY* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01862 141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 110 IPR027417 -
Lapu3g01862 141 SMART iq_5 65 87 IPR000048 GO:0005515
Lapu3g01862 141 SMART iq_5 88 109 IPR000048 GO:0005515
Lapu3g01862 141 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Lapu3g01862 141 ProSiteProfiles IQ motif profile. 90 117 IPR000048 GO:0005515
Lapu3g01862 141 Pfam IQ calmodulin-binding motif 69 87 IPR000048 GO:0005515
Lapu3g01862 141 Pfam IQ calmodulin-binding motif 90 107 IPR000048 GO:0005515
Lapu3g01862 141 Gene3D - 64 117 - -
Lapu3g01862 141 PANTHER IQ-DOMAIN 5-RELATED 37 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01862 Lapu-Chr3 33383615 33384192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01862 1 132 IQD Protein Family AT3G51380 43.939 7.40e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01862 - - vun:114179724 197.593