Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01834 ATGACTAAATTTCTCATCCTCCTGCTATTGTGCACACGCTTCTTATCATGCGCCCACTGCGTCTCCGTCACCGAGATCCAAGCCTTGACGTCGTTCAAACTCAACCTTCACGACCCTCTAGGCGCGCTTAACACCTGGGACCCGTCAACGCCGTTAGCTCCCTGCGACTGGCGTGGTGTTTATTGCAAAAATGACCGAGTCACGGAGTTACGTCTGCCTCGCCTTCAACTCAGTGGTCAACTTGGTGACCGCATTTCAGACCTACGCATGCTTCGGAGGCTAAGCCTTCGTTCCAACTCCTTCAACGGCTCCATTCCCCACTCCCTCTCCAAATGCACGCTCCTACGCGCCTTGTTCCTACAGTATAACGACTTCTCCGGCCAACTTCCACCGGAGATCGGAAACCTCGCCGCTCTCCAGATTCTCAACGTCGCCGGCAACAACCTCTCCGGGGAAATCCCTGCCGAACTTCCCCTACGTCTCAAATACTTCGACCTCTCCTCCAACGCCTTCTTCGGCGAGATTCCGAGCACCATCGCCGGCTTTTCCCAGCTTCAGCTTATCAACCTCTCTTACAACAAATTCTCCGGCCAGATTCCGGCGCGCATCGGAGAGCTTCAGAATCTGCAATACCTTTGGCTCGATCACAATGTTCTCAGCGGAACCTTGCCTTCATCTCTCGCGAATTGTTCCTCGCTCGTGAATTTGAGCGTTGAAGGTAACAAGCTCGCCGGCGTGTTACCTGCTGCGATTGCGGCTCTCCCGAACCTCCAGGTGTTGTCCCTCGCGCAAAACAACTTCACCGGTGCCGTTCCGGCTTCCGTTTTCTGCAACATTTCGCTCAAAGCGCCGTCACTTCGCATCGTTCAGTTAGGGTTTAACAGTTTTACGGATTTCGCGTGGCCTCAAGCCGCCACGTGTTTCAGTGTCCTTGAGGTTTTGGATATTCAGCAAAATAGCGTGCGCGGCACGTTTCCGCTCTGGTTAACCAACGTGACCACGTTATCGGTTCTCGACATTTCCGGTAACAGACTTTCCGGCGAGTTTCCGCCGGAAATTGGAAGTCTCTGGAAATTGGAAGAGCTGAAGGTGGCCAACAATTCGTTCGCAGGCGAGATTCCGCCGGAAATAGTAAAATGTAGGTCCCTGCGTGTTGTTGATTTCGAAGGGAACCGGTTTTCCGGTGAGATTCCTTCGTTTATAGGAAATCTGACGGTGCTGAAGGTTCTCTCTCTTGGTGTGAATCATTTCTCTGGTTCTGTTCCGGTGAGTTTTGGTGGGCTTGTTTCTCTTGAAACCATGAGTTTAAGGGGTAATAGATTGAATGGTACAATGCCGGAGGAAGTGATGGGGTTGAAGAATTTGACAGTGTTGGACCTCAGTGGAAACCAGTTTACGGGTCATGTTTCTGGGGAAATTGGGAATCTGAGTAAATTAATGGTTCTGAATCTGAGTGGTAATGGCTTCTATGGAGAAATTCCTTCTACTTTGGGAAATCTTTTCAGGCTCACCACACTTGATTTGAGCAAACAAAATCTCTCCGGTAAATTGCCAAATGAAATTTCGGGGCTTCCCAGTTTGCAGGTCATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATCCCCGAAGAGTTTAGCAGCTTGACCAATTTGAAATATGTGAACCTAAGCTCTAACGAGTTTACTGGGCATGTTCCTAAGAGCTATGGCTTTCTCCGATCGTTGGTTGTTCTTTCATTGTCTCATAACCGCATCATGGGAATTATTCCCCCGGAAATTGGAAACTGCTCTGACATTGAAATTCTCGAGCTTAGATCAAATTACTTGGGGGGTCCCATTCCCACTGATCTCTCTGGCCTTGAACATTTGAAAGTCCTTGATTTGGGTAAGAACAATTTAACTGGGGCTTTGCCTGAGGATATCTCCCAATGCTCAGAGTTAACTGCTGTGTTAGCAGATCATAACCAACTTTCGGGTGCTATACCGGGGTCATTGGCGGAGTTATCATACCTAACTATGCTGGATCTCTCCGCCAATAAATTGAGTGGCGAAATCCCCAGTAATCTAAACGCCATCCCTGGTTTGGTGTACTTCAATGTCTCAGGCAACAACTTAGAAGGTGAGATTCCACCTATGTTGGGTTCTAAATTCAACGACTCCTCTGTATTTGCAAGCAACCAGAACTTGTGCGGGAAGCCTTTGGATAGAAAGTGCGAAGAGGCAGACAGTAGGGAGAGAAACAGGTTGATAGTGTTAATCATTATCATCGCGATTGGAGTTTGCTTATTGGCATTGTGTTGCTGCTTCTACATCTCCAGCCTTCTGAGATGGCGCAGAAGGATCAAAGCAGCAGTGTCAGGGGAGAAGAAAAAGAGTCCAAGAACTTCAGGAACAAGTCAAGGTCGAAGCAGCACTGACACCAACGGACCAAAACTCGTCATGTTCAACGCCAAAATCACACTCGCCGAAACAATCGAAGCAACAAGGCAATTCGACGAAGAAAACGTGCTGAGCAGAACAAGACACGGTTTAGTATTCAAGGCCTGCTACAACGACGGAATGGTCCTTTCTATTCGCAAGCTCCTAGACGGGTCATTAGACGAAAACATGTTCAGAAAAGAAGCCGAATCGTTAGGAAAAATCAGGCACCGAAATCTAACCGTTCTCAGAGGCTACTATGCAGGTCCACCGGATGTTAGACTCTTGGTCTACGATTACATGCCCAATGGCAACCTCGCAACGTTGCTCCAAGAAGCATCACACCTTGATGGTCACGTTCTGAATTGGCCAATGCGACACCTCATTGCATTAGGAATAGCCCGTGGCATAGCGTTTCTGCACCAATCCTCACTTATCCACGGTGACATCAAACCCCAAAACGTGCTCTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGTTTGGACAAGTTAACAGTTACCAACCCGGTTGAAGCCTCCACTTCAACCACTGCTTCAGTTGGCACGTTGGGGTACGTGTCCCCAGAGGCTGTGTTAACAGGGGAACCCACGAAAGAGTGTGACGTGTACAGCTTCGGCATCGTTTTGCTGGAGCTTCTCACTGGGAAGAGACCAGTGATGTTCACGCAGGATGAGGATATAGTGAAGTGGGTGAAGAAACAGTTACAAAACGGTCAAATTACAGAGCTACTAGAGCCTGGTTTGTTTGAACTTGACCCAGAGTCTTCTGAATGGGAAGAGTTCTTGCTGGGTGTGAAAGTTGGTCTGCTTTGCACAGCACCAGACCCTCTTGATCGACCAACCATGGCTGACATCGTGTTCATGCTCGAAGGTTGTCGTGTTGGACCCGATATTGCATCCTCCGCTGAACCCACGGCGCAACCTTCTCCGGTGTAA 3381 0.4883 MTKFLILLLLCTRFLSCAHCVSVTEIQALTSFKLNLHDPLGALNTWDPSTPLAPCDWRGVYCKNDRVTELRLPRLQLSGQLGDRISDLRMLRRLSLRSNSFNGSIPHSLSKCTLLRALFLQYNDFSGQLPPEIGNLAALQILNVAGNNLSGEIPAELPLRLKYFDLSSNAFFGEIPSTIAGFSQLQLINLSYNKFSGQIPARIGELQNLQYLWLDHNVLSGTLPSSLANCSSLVNLSVEGNKLAGVLPAAIAALPNLQVLSLAQNNFTGAVPASVFCNISLKAPSLRIVQLGFNSFTDFAWPQAATCFSVLEVLDIQQNSVRGTFPLWLTNVTTLSVLDISGNRLSGEFPPEIGSLWKLEELKVANNSFAGEIPPEIVKCRSLRVVDFEGNRFSGEIPSFIGNLTVLKVLSLGVNHFSGSVPVSFGGLVSLETMSLRGNRLNGTMPEEVMGLKNLTVLDLSGNQFTGHVSGEIGNLSKLMVLNLSGNGFYGEIPSTLGNLFRLTTLDLSKQNLSGKLPNEISGLPSLQVIALQENKLSGVIPEEFSSLTNLKYVNLSSNEFTGHVPKSYGFLRSLVVLSLSHNRIMGIIPPEIGNCSDIEILELRSNYLGGPIPTDLSGLEHLKVLDLGKNNLTGALPEDISQCSELTAVLADHNQLSGAIPGSLAELSYLTMLDLSANKLSGEIPSNLNAIPGLVYFNVSGNNLEGEIPPMLGSKFNDSSVFASNQNLCGKPLDRKCEEADSRERNRLIVLIIIIAIGVCLLALCCCFYISSLLRWRRRIKAAVSGEKKKSPRTSGTSQGRSSTDTNGPKLVMFNAKITLAETIEATRQFDEENVLSRTRHGLVFKACYNDGMVLSIRKLLDGSLDENMFRKEAESLGKIRHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGIAFLHQSSLIHGDIKPQNVLFDADFEAHLSDFGLDKLTVTNPVEASTSTTASVGTLGYVSPEAVLTGEPTKECDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQNGQITELLEPGLFELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMADIVFMLEGCRVGPDIASSAEPTAQPSPV* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01834 1126 SUPERFAMILY L domain-like 493 733 - -
Lapu3g01834 1126 FunFam Inactive leucine-rich repeat receptor-like protein kinase 159 249 - -
Lapu3g01834 1126 Pfam Leucine Rich Repeat 502 524 IPR001611 GO:0005515
Lapu3g01834 1126 FunFam Putative LRR receptor-like serine/threonine-protein kinase 794 906 - -
Lapu3g01834 1126 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 17 545 - -
Lapu3g01834 1126 Gene3D Transferase(Phosphotransferase) domain 1 907 1115 - -
Lapu3g01834 1126 ProSiteProfiles Protein kinase domain profile. 831 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01834 1126 Pfam Protein kinase domain 843 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01834 1126 SUPERFAMILY L domain-like 47 336 - -
Lapu3g01834 1126 SUPERFAMILY L domain-like 329 575 - -
Lapu3g01834 1126 FunFam Leucine-rich repeat receptor-like protein kinase TDR 513 740 - -
Lapu3g01834 1126 MobiDBLite consensus disorder prediction 788 810 - -
Lapu3g01834 1126 Gene3D Ribonuclease Inhibitor 472 747 IPR032675 -
Lapu3g01834 1126 SMART LRR_sd22_2 452 478 - -
Lapu3g01834 1126 SMART LRR_sd22_2 572 598 - -
Lapu3g01834 1126 SMART LRR_sd22_2 668 691 - -
Lapu3g01834 1126 SMART LRR_sd22_2 254 281 - -
Lapu3g01834 1126 SMART LRR_sd22_2 206 238 - -
Lapu3g01834 1126 SMART LRR_sd22_2 620 643 - -
Lapu3g01834 1126 SUPERFAMILY Protein kinase-like (PK-like) 813 1111 IPR011009 -
Lapu3g01834 1126 FunFam Uncharacterized protein 254 470 - -
Lapu3g01834 1126 SMART serkin_6 831 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01834 1126 Gene3D Ribonuclease Inhibitor 160 250 IPR032675 -
Lapu3g01834 1126 Gene3D Phosphorylase Kinase; domain 1 795 906 - -
Lapu3g01834 1126 MobiDBLite consensus disorder prediction 791 810 - -
Lapu3g01834 1126 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Lapu3g01834 1126 Pfam Leucine rich repeat 525 585 IPR001611 GO:0005515
Lapu3g01834 1126 Pfam Leucine rich repeat 600 657 IPR001611 GO:0005515
Lapu3g01834 1126 Pfam Leucine rich repeat 381 441 IPR001611 GO:0005515
Lapu3g01834 1126 Gene3D Ribonuclease Inhibitor 251 471 IPR032675 -
Lapu3g01834 1126 FunFam Putative LRR receptor-like serine/threonine-protein kinase 23 158 - -
Lapu3g01834 1126 SMART LRR_typ_2 620 644 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 524 547 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 548 571 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 332 356 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 476 500 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 254 278 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 88 112 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 668 692 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 206 230 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 572 596 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 404 427 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 136 160 IPR003591 -
Lapu3g01834 1126 SMART LRR_typ_2 452 475 IPR003591 -
Lapu3g01834 1126 Gene3D Ribonuclease Inhibitor 20 159 IPR032675 -
Lapu3g01834 1126 ProSitePatterns Serine/Threonine protein kinases active-site signature. 951 963 IPR008271 GO:0004672|GO:0006468
Lapu3g01834 1126 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 907 1112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01834 Lapu-Chr3 32144525 32148409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01834 4 1126 Receptor kinase-like Gene Family AT4G36180 66.021 0.0 1441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lapu3g01834 Pkinase 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01834 - - vun:114175753 2028.83