Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01832 ATGATGGAGTCATGTGTCCCACCAGGGTTTCGGTTCCACCCAACAGATGAAGAACTTGTGGGTTATTATCTCAGGAAGAAAGTTGCTTCTCAGAAGATTGATCTTGACGTTATCAAAGAAATAGACCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATAGGGTATGAGGAGCAGAATGAGTGGTATTTCTTTAGCCATAAAGACAAGAAATATCCAACTGGGACAAGAACGAACAGAGCTACCATGGCAGGGTTTTGGAAGGCGACAGGAAGAGACAAATCAGTGTACGAAAGGACCAAACTTATTGGCATGAGAAAGACCCTCGTTTTCTACAAAGGAAGAGCCCCTAATGGACAAAAAACTGACTGGATCATGCACGAGTATAGGCTTGAAACTGTCGAGAATGGACCTCCACAGGAAGAAGGATGGGTTGTGTGCAGAGCATTCAGGAAAAGAACTAACGGCCAAACAAAGACAATTGAAGGATGGGATCGAAGCTACATATACGATGAACAAGCAAGTGGTGTCAACTCTTCTGTGGGCCCTATTGACCTTATGTTAAGGCAATCTCAGAGGAATAATATTTCTGCTGAAAATTTCTTGTACAAGCAAGAGACAGAAGCAGATAAATTGAGCTTCATGCATTCAGAACAATTGATGCAGCTTCCGCAGCTAGAAAGTCCTTCTATGCCATTAGTAAAGAAGCAAACCTCAGTGTCCCTAATATCAGACAAGATTAACAAGGAAGATGATTCTCAAAAGGGATTATCCAACACAAAGAAAGTGACTGATTGGAGAGCACTTGACAAGTTTGTGGCTTCTCAGTTGAGTCAAGAAGAGAGGCATGAAATAGGGGTGTCAGGCTTTGCAACTCACACTAGCTCGGACATGGCATTGCTGCTATTCCAGAATACTAGGGAAAATGAAAGGAACAAGTTCAACCCGTTTTTAAATACAAGTTCATCAGACTGTGACATTGGGATATGCGTATTCGAAAAATGA 1014 0.4211 MMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIKEIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENGPPQEEGWVVCRAFRKRTNGQTKTIEGWDRSYIYDEQASGVNSSVGPIDLMLRQSQRNNISAENFLYKQETEADKLSFMHSEQLMQLPQLESPSMPLVKKQTSVSLISDKINKEDDSQKGLSNTKKVTDWRALDKFVASQLSQEERHEIGVSGFATHTSSDMALLLFQNTRENERNKFNPFLNTSSSDCDIGICVFEK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01832 337 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Lapu3g01832 337 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Lapu3g01832 337 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Lapu3g01832 337 FunFam NAC domain-containing protein 15 159 - -
Lapu3g01832 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 244 - -
Lapu3g01832 337 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01832 Lapu-Chr3 32060774 32065982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01832 2 336 NAC Transcription Factor Family AT2G18060 60.109 1.09e-150 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu3g01832 NAM 4.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01832 - - gmx:100797578 542.347