Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01829 ATGAAGCGAGCGAGGAAATCAAACCGGGTTTCGTGGGCTACTGGAGGGAACCTGTGTCAGGTAAAATTGTTCTTGTCTGACGATTTCCCCTCAAAAGTAGGCGAACATTCGGAAGATCATCTTCAAGTAAAGACATCGATGCTAAATTCAAATTCCACTATTAATGATAGTAATGATTTGCCTCCTGGGTTTGAAAGCAGTCATTTTCTAAACCAAACAAAGGTTGATTTCCGCTGCATTTCTCAGATAAAATGGGAATGCCCTGCGCTGTTTGTTGTCAGTTCTAAATGGTGTGTTGCAGCTGGTGAAGAAAGTAGGGAGAAGGAGGAACAGAAACTGAGAGAAAAGAGGGTGCTTGAAGCTGTTTATCCCCGTCTTTCAGCCATTCCTGCTAGCCCTTCTGTCTCTTTGGATGTAGAAGATGAAGATTATGATGATGATGTTACTCCCCTCATCCCTATCATTCCCATTGAAGAGGAAGAATCTATGGATATTTTGCCTGAAGTGGCAGTAACTGGGAACCCTTCCCCCAATGTGCAGTCGAATAATCCTCTGCAATATATATCTGCTGAAACTTCCATTCGTTCAGCTTCTACCGCTTCTTATACTGATTCCTTGGATCCCTGTATAGGCATCCCCTTTGGTGGGGTATCTTTGGGTTTGGAAGCTGATATGGCAGCTTCGGTTGTTGCAACCATTATGAGGAGTACTGAGCAAGGTTCCCCGATTGATATGGATTTACTGGTTAAAATATTTAATGATCCAAAAATACTGGACAAGTTGATTAATGAACGTAGAACTGGAGCTACCACCATTAGTACTTCCACAAATACTGTGGATACCACTCCTGCTGTTAATCCTGCTATTCCAGTTCTGTTGTCTGCATCTACTGATGTGAAAGTTTCTGCTACACCCACAAGTGCAGTGGGTTCATTGCCTTTTGGGCTGAAGCCTGCAAATTCATCAGTTTCCGTATCCAGTCCTATGCCTGACAAGCCAGCCACTTTGTCAGTGACTGCAATTCCATCAGTTTCACTGTTGTCTTCTGCTCATGATAATCCAGTTACTGCATCAGCTCCATTGTCTAGGCCTGTATCTGGTAAGCCAGTAACACCCTCTGTTTCATTGCTTACAAATACACCTGCATCTCATATAGCCAGGTCTGTCAGCAAACAATTTCACAATGTGTCAAGTGGGATTTCCCCTGCTTTAAATACCCAATCTCAGCAAGATACAGCTCTGGCATCTGGGCCTAAGCGAGCCGCCCCAGTGGCGTCCATATGTTCTGGTGAATTAAACACTGGTCCATTGCCATCTCTTACCAGGAACTTGCATGCTGTTGTGAATCAGGTGCAAGCCACTGCTAGTACATTGCCTTATAAACTAAGCACAGGTTCATCAGCATTTGCTGTAAAGGATGCCAACTACTATAAAAACCTCATCAGGCAACATGGTGCAGATAAGCAAGATATGCAGGACTCTTACATAGGTATCGGTCATAGTAACTTCCATGATATGAAACCGGTACATAACTTTAAACAAGGAGAAGTGAAACACAAAATCCAGAAACCATGCATATACTTTAAAAGCTCAAAGGGGTGCCGAAATGGTTCCAATTGCCCCTATCAGCATGATGTTTCAGCTCAGTGGGGAGCTGGTAACATCTTAGGGGCACAGAGTGCAAAAAGATTGAAATCGGGACCGTAG 1707 0.4364 MKRARKSNRVSWATGGNLCQVKLFLSDDFPSKVGEHSEDHLQVKTSMLNSNSTINDSNDLPPGFESSHFLNQTKVDFRCISQIKWECPALFVVSSKWCVAAGEESREKEEQKLREKRVLEAVYPRLSAIPASPSVSLDVEDEDYDDDVTPLIPIIPIEEEESMDILPEVAVTGNPSPNVQSNNPLQYISAETSIRSASTASYTDSLDPCIGIPFGGVSLGLEADMAASVVATIMRSTEQGSPIDMDLLVKIFNDPKILDKLINERRTGATTISTSTNTVDTTPAVNPAIPVLLSASTDVKVSATPTSAVGSLPFGLKPANSSVSVSSPMPDKPATLSVTAIPSVSLLSSAHDNPVTASAPLSRPVSGKPVTPSVSLLTNTPASHIARSVSKQFHNVSSGISPALNTQSQQDTALASGPKRAAPVASICSGELNTGPLPSLTRNLHAVVNQVQATASTLPYKLSTGSSAFAVKDANYYKNLIRQHGADKQDMQDSYIGIGHSNFHDMKPVHNFKQGEVKHKIQKPCIYFKSSKGCRNGSNCPYQHDVSAQWGAGNILGAQSAKRLKSGP* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01829 568 ProSiteProfiles Zinc finger C3H1-type profile. 520 547 IPR000571 GO:0046872
Lapu3g01829 568 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 566 - -
Lapu3g01829 568 MobiDBLite consensus disorder prediction 353 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01829 Lapu-Chr3 31855666 31865025 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lapu3g01829 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01829 - - pvu:PHAVU_003G260700g 768.844