Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01806 ATGACTTCCTGCACCACGCTCTACGAGATTCTTGGAATCTGCGCCGCCGCGTCGAATGGAGAGATCAAATCGGCATACCGGCAACTGGCGAGGGTCTGCCACCCGGACGTGGCTCCGGTGGGGCGAAAGGAATCCTCTGCGGGCGAGTTCATGAAGATCCATAATGCGTATCGCACGCTGTTGAACCCCGAGAAGCGTGCCAAGTATGATCGAAGTTTGTTTCCGCATGGGCGAGTGATCTCAACGGCGTCGTCGGGGTTTTCCAGCTACAGTGGTCGGAAATGGGAAACTGACCAGTGTTGGTAG 306 0.5654 MTSCTTLYEILGICAAASNGEIKSAYRQLARVCHPDVAPVGRKESSAGEFMKIHNAYRTLLNPEKRAKYDRSLFPHGRVISTASSGFSSYSGRKWETDQCW* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01806 101 Gene3D DnaJ domain 1 90 IPR036869 -
Lapu3g01806 101 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Lapu3g01806 101 CDD DnaJ 6 62 IPR001623 -
Lapu3g01806 101 SMART dnaj_3 5 65 IPR001623 -
Lapu3g01806 101 Pfam DnaJ domain 7 70 IPR001623 -
Lapu3g01806 101 PRINTS DnaJ domain signature 26 41 IPR001623 -
Lapu3g01806 101 PRINTS DnaJ domain signature 8 26 IPR001623 -
Lapu3g01806 101 PRINTS DnaJ domain signature 45 65 IPR001623 -
Lapu3g01806 101 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 84 - -
Lapu3g01806 101 SUPERFAMILY Chaperone J-domain 2 78 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01806 Lapu-Chr3 31200585 31201284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01806 8 70 C2H2 Transcription Factor Family AT1G74250 42.424 3.96e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01806 - - gmx:100779511 136.732