Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01784 ATGTCATTGTCTTCATTAAAAAACAATAGATTCAGAAGGATGAGTCTTCTCTATGGAGAGCTTCTTTCTCAATGGCTTCTACTCATTCTCATGTGTTACATAACATCCATGTTTCATTATGTCTCTGCATTGAGCCTACCAAACAATGAAACTGTGCCAGCAGTCATTGTCTTTGGGGACTCCATAGTAGATACAGGAAACAACAACTATATCTCCACTCTTGTCAAATGCAATTTCCCACCATACGGTAGAGATTTTGCTGAAGGAAATCATCCATCTGGGAGGTTCAGCAATGGCTTAGTCCCATCAGATATTATTGCTGCAAAATTTGGAGTTAAGAAGTTCTTACCTCCTTATCTTGATCCAAATTTGCATGTTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCAGATCAACTAGACATGTTCAAGGAGTATATAAAGAAGATAAACGATGCAGTTGGAGGAAACAGAACCACACTAATAGTGTCTAAGAGCATATACATAGTGTGCGTAGGAAGTGATGACATTGCCAATACTTACACTCAAACACCGTTTAGGCGTCCCGAGTATGATATTTCTTCATACACTGATCTAATGGCCGCTGAAGCCTCAAAGTTCTTGGAGACACTTTATAAAATGGGAGCTAGAAGGATAGGAGTATTTGGTTTACCAGCCATAGGGTGTGTGCCCTCACAAAGAACAATGGCTGGAGGCTTGGATAGAGCATGTGTGGAATCTTCTAATAAAGCAGCAATGCTCTTCAATTCGAAGCTCTCTTCCCAAATGAATGCACTTAAAAAAAAGTTTTCAGACTCTAAACTTGTTTACCTTGACTGTTACAACGGATTGCTAAGCATGATTGGAGATCCTGCTAAATATGGTTTCGAAGTGGCAGCGAAAGGATGCTGCGGCACAGGGGATATAGAAGTGAGCATTTTGTGCAACCGTTACGCCGTAAACACATGCACTAACTCTTCTGACTACATATTTTGGGACAGCTATCATCCAACAGAGAAGGCTTACAATGTTCTTACCAAATCACAAACAAATTATAGCAAGTTTGCATTTCCTGCCGTTATAGTTTTTGGTGACTCAATCTTGGATACTGGGAACAACGATTATATTGAAACAGTAGTGAAGGCAGATTTCAGACCATATGGGAGGGATTTCTTTGGAGGAAAACCCACAGGAAGGTTTAGCAATGGCAGGATCCCTTCAGACTTTTTTGCTCAAATATTTGGAATAAAGGAGACTTTGCCACCCTATCTTGATCCAACTCTGGAGATTGAAGACCTCTTAACCGGGGTGAGTTTTGCCTCTGCCGGCTCAGGATATGATCCTCTCACAGCAGAACTAGCAGCAGTGTTGTCAGCGGAGGATCAACTGAATATGTTCAAAGAGTACATAGGAAAACTGAAGGCAGATGTGGGGAAAGAAAGGACAGTTTTCATTCTAGCAAAAAGCATATTTTTTATTAGTATGGGAAGCAATGACATTTCAGCAACATATTTCTTGACACCATATCGGAGAAATGAGTATAATGTTGAAGAGTATACAAGTATGCTAGTCAATATATCTTCAAATTTTCTTCAGGAACTGTATAAATATGGAGCAAGAAAGATTGGAGTACTCAGCCTAGGTCCAATAGGATGTATGCCACTGCAAAGAACAATTGGGGGAGGCGAAGAAAGGAATTGTGTAGAATCAGTAAACCAAGCAGCCATGGTCTACAACTCCAAGCTTTCTTCTTCAATAGTGGCTCTCAACAAAAGGCTTCCAAAAGCTAGGCTTGTATACCTCGAGAACTATAGTGAATTCAATGAATTTATCCAACACCACAATAAATTTGGATTTGAAGTGGAGGATACTGCATGCTGTGGCATTGCAAATATTGAAGCAGGCTTTCTCTGTAACTCTTTCTCCTTAAAAGTATGTGAAAATGCTACAAAATATGTATTCTGGGACAGTGTTCACCCCACAGAGCGAACTTACAGTATACTTGTCTCAAATATCATAGGAAAGAATGTTCAGAAGTTTGTTTGA 2046 0.3993 MSLSSLKNNRFRRMSLLYGELLSQWLLLILMCYITSMFHYVSALSLPNNETVPAVIVFGDSIVDTGNNNYISTLVKCNFPPYGRDFAEGNHPSGRFSNGLVPSDIIAAKFGVKKFLPPYLDPNLHVQDLLTGVSFASDQLDMFKEYIKKINDAVGGNRTTLIVSKSIYIVCVGSDDIANTYTQTPFRRPEYDISSYTDLMAAEASKFLETLYKMGARRIGVFGLPAIGCVPSQRTMAGGLDRACVESSNKAAMLFNSKLSSQMNALKKKFSDSKLVYLDCYNGLLSMIGDPAKYGFEVAAKGCCGTGDIEVSILCNRYAVNTCTNSSDYIFWDSYHPTEKAYNVLTKSQTNYSKFAFPAVIVFGDSILDTGNNDYIETVVKADFRPYGRDFFGGKPTGRFSNGRIPSDFFAQIFGIKETLPPYLDPTLEIEDLLTGVSFASAGSGYDPLTAELAAVLSAEDQLNMFKEYIGKLKADVGKERTVFILAKSIFFISMGSNDISATYFLTPYRRNEYNVEEYTSMLVNISSNFLQELYKYGARKIGVLSLGPIGCMPLQRTIGGGEERNCVESVNQAAMVYNSKLSSSIVALNKRLPKARLVYLENYSEFNEFIQHHNKFGFEVEDTACCGIANIEAGFLCNSFSLKVCENATKYVFWDSVHPTERTYSILVSNIIGKNVQKFV* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01784 681 CDD SGNH_plant_lipase_like 53 347 IPR035669 -
Lapu3g01784 681 Gene3D SGNH hydrolase 352 676 IPR036514 -
Lapu3g01784 681 Gene3D SGNH hydrolase 42 351 IPR036514 -
Lapu3g01784 681 FunFam GDSL esterase/lipase APG 44 351 - -
Lapu3g01784 681 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 55 66 IPR008265 GO:0006629|GO:0016298
Lapu3g01784 681 SUPERFAMILY SGNH hydrolase 54 347 - -
Lapu3g01784 681 FunFam GDSL esterase/lipase APG 352 677 - -
Lapu3g01784 681 PANTHER GDSL ESTERASE/LIPASE EXL3 355 672 - -
Lapu3g01784 681 CDD SGNH_plant_lipase_like 358 676 IPR035669 -
Lapu3g01784 681 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 360 371 IPR008265 GO:0006629|GO:0016298
Lapu3g01784 681 Pfam GDSL-like Lipase/Acylhydrolase 360 670 IPR001087 GO:0016788
Lapu3g01784 681 Pfam GDSL-like Lipase/Acylhydrolase 55 345 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01784 Lapu-Chr3 30475473 30490151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01784 356 673 Pollen Coat Proteome AT1G75910 39.628 9.49e-73 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01784 - - ahf:112723705 912.524