Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01775 ATGAAGGTGATATGGTCATTCTCGACGGGATTGCCCATCTACCAATCGTATAGACCTCCCTTAAAAAAGGATAATGATAAAGATAATGCATCTGCAGTACTCTTGAGTGGGTTCGTGGAATGTGGGGATGACTGGTCATTGTACATGCACGACAGACACTTTGGTAAAATGAGAATCTCAGAATCTATTGCAGAATATGTAGCTCGTACACCTACACTTTCAGATGATGGAGCAGTGACACTTGGATCCAAAAGAAGTACTTTGTTTGAAGTTGATGCTAAAACTGGATCAATCATTCAAATCCATGCATTGTCTGATCTTGTTAATGCTTCTGCACCTTGGAGTGATGAGAGGCAAAGTGTGACAAATATCCCCAACATAAAGAATAGGGATCTTGCCGATCCTTTGAAACTAAATTCACCACAGCTGCGTCTTAAGATTTTTAGGACGGATTATTCTCTTCAATCTGTTGGTCCTAGCTCAGGAATAGTTTTGTGGACTATGGCAGTAGCTGAATTTCAGGCTGTATTATTATGCCAACATTCCTCTTCTGACGCAGAGGATGATTATGCTTCTGATAGTGGCCTCAATTTTACAATGCCATACCCATGTCAAGAAATACGACAAGTTTTCCGCCTGAAAAAAAATCTTCTAATTGAACCTTCACTAACTGAAAGATTACTTTGGGATTATCATGAAAATGATATGCTCTCAATGCCCTACTCAAATCTAATGCTTCCTTTGCAGCCAAATATTGATAGATTATTCAATGGTGATGATGATAATATGATGCTCGCTCAACCCCTCATCGAGATTACTACACCAAGGGAAGTTTATTTGAACAGGACGATTGAATGGCCAACTCCATTACCTCTTGTATTGTTTACTCTCTTTCTTTTAACAATTTCACTCATCTATCCTCTAGTTTTTAAGGATCAAGATACACGGAAGGACCAAAATAGTGAGTCTAAATTAAAAAGTTCACCTGCTAAGAAAAAGAAAACACATAAAACAGGAAGGAAAAATGGAATTATCAATAAAAGGGAAAATCACACATCTTTAGACAATGAGAATGTTCAGACACAAAAGGATAATGAAAGAGAAGTATGGAAGCACTTTAATCATGTTAATGAAAGTGTTGATGGACAAAGAATTGGTAAATTATTTGTTTCAAATAAAGAGATTGCTAAGGGAAGCAATGGCACGGTTGTGCTTGAGGGAATATATGAAGGTCGAGCTGTTGCTATCAAACGTCTTGTCAAGACTCACCATGACATAGCTGATAAAGAAATAAAAAACCTCATCGTGTCTGACCGTCATCCAAATATTGTCCGATGGCATGGTGCGGAGTATGATAACGATTTTGTTTACCTTGCTTTGGAACGATGTACATGCAATTTAGATGATTTGGTTCAAATTTATTCAGATACATCTTTAAACAGTGTGTTTAGGAAGGACCAAGGTATGGAATGCTTGATTAAGTCCCAAATGGAGATGGGGAAGGATAGTACACAGTGTCTTTGGAAGGAAAATGGCTATCCATCTCCTCTATTACTAAAACTGATGAGGGACATTGTCTCTGGGGTCATTCATTTGCATGAGTTGGGAATAATACATCGGGATATGAAACCACAAAATGTTCTAATAATCAAGGAAAGATCCTTATGTGCAAAACTTTCTGATATGGGGATTAGCAAATGCCTTCTTGAAAATATGTCTTCTCTGGGTAATAATGCTACTGGTGGTGGCAGTTCAGGTTGGCAAGCACCAGAACAACTTGTTCAAGGACGTCAAACACGGGCAGTAGATATGTTTAGTTTAGGTTGCGTCTTCTTTTTCTGCATTACCGGGGGAAGACATCCATTTGGAGAACGTATTGAACGCGATATCAATATTTTGAAAAATCACATGGACCTTTTCTTAGTGGAGTTCATTCCTGAAGCCAAAGATCTTATTAGTCGTTTATTAAACCCTTACCCTGATCTAAGGCCAAAGGCGACTGAAGTATTGTACCATCCTTTTTTCTGGAGTTCCGAGATGCGACTCTCCTTTTTGCGTGACACCAGTGACAGGGTGGAATTGGAAAACAGAGAGACTAGTTCTGATCTTTTGGTGACATTAGAAAGCATTGCCACAGATGCCTTGGGTGGAAAATGGGATGAGAGGATGGAACCAGATTTCATTGCTAACATTGGTCATTATCGGTGGTATAATTTTAACAGTGTTCGAGACTTGTTGCGAGTTATGAGAAACAAACTAAATCATTATAGAGAATTGCCTCCAGAAATCCAGGAACTTGTAGGACCTGTTCCAGAAGGATTCTACGAATACTTTGCAAGTCGATACCCAAGACTCTTGATTGAAGTGTATAAAGTTATACTCCATTATTGCAAAGAGGAAGAATGTTTCCAAAGATATTTTAAAAATGTTGAGTAG 2436 0.3842 MKVIWSFSTGLPIYQSYRPPLKKDNDKDNASAVLLSGFVECGDDWSLYMHDRHFGKMRISESIAEYVARTPTLSDDGAVTLGSKRSTLFEVDAKTGSIIQIHALSDLVNASAPWSDERQSVTNIPNIKNRDLADPLKLNSPQLRLKIFRTDYSLQSVGPSSGIVLWTMAVAEFQAVLLCQHSSSDAEDDYASDSGLNFTMPYPCQEIRQVFRLKKNLLIEPSLTERLLWDYHENDMLSMPYSNLMLPLQPNIDRLFNGDDDNMMLAQPLIEITTPREVYLNRTIEWPTPLPLVLFTLFLLTISLIYPLVFKDQDTRKDQNSESKLKSSPAKKKKTHKTGRKNGIINKRENHTSLDNENVQTQKDNEREVWKHFNHVNESVDGQRIGKLFVSNKEIAKGSNGTVVLEGIYEGRAVAIKRLVKTHHDIADKEIKNLIVSDRHPNIVRWHGAEYDNDFVYLALERCTCNLDDLVQIYSDTSLNSVFRKDQGMECLIKSQMEMGKDSTQCLWKENGYPSPLLLKLMRDIVSGVIHLHELGIIHRDMKPQNVLIIKERSLCAKLSDMGISKCLLENMSSLGNNATGGGSSGWQAPEQLVQGRQTRAVDMFSLGCVFFFCITGGRHPFGERIERDINILKNHMDLFLVEFIPEAKDLISRLLNPYPDLRPKATEVLYHPFFWSSEMRLSFLRDTSDRVELENRETSSDLLVTLESIATDALGGKWDERMEPDFIANIGHYRWYNFNSVRDLLRVMRNKLNHYRELPPEIQELVGPVPEGFYEYFASRYPRLLIEVYKVILHYCKEEECFQRYFKNVE* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01775 811 ProSiteProfiles Protein kinase domain profile. 389 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01775 811 Pfam Ribonuclease 2-5A 681 807 IPR010513 GO:0004540|GO:0006397
Lapu3g01775 811 Gene3D KEN domain 678 811 IPR038357 -
Lapu3g01775 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Lapu3g01775 811 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 381 461 - -
Lapu3g01775 811 Gene3D Transferase(Phosphotransferase) domain 1 498 677 - -
Lapu3g01775 811 SMART PGNneu 740 794 - -
Lapu3g01775 811 SUPERFAMILY Protein kinase-like (PK-like) 381 696 IPR011009 -
Lapu3g01775 811 MobiDBLite consensus disorder prediction 317 350 - -
Lapu3g01775 811 Gene3D Phosphorylase Kinase; domain 1 374 461 - -
Lapu3g01775 811 ProSiteProfiles KEN domain profile. 678 809 IPR010513 GO:0004540|GO:0006397
Lapu3g01775 811 SMART serkin_6 389 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01775 811 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 679 811 - -
Lapu3g01775 811 PANTHER IRE1-RELATED 58 809 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lapu3g01775 811 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 500 677 - -
Lapu3g01775 811 CDD RNase_Ire1 679 807 - -
Lapu3g01775 811 Pfam Protein kinase domain 391 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01775 Lapu-Chr3 30061566 30073186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01775 415 674 MAP Kinase Kinase Kinase AT3G06030 27.170 2.20e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lapu3g01775 Pkinase 5.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01775 K08852 - gmx:100788389 1363.59