Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01774 ATGAGTAGAGTTGAGCTTGTGGTGTTGTTGGTTCTCTTCGAAGGGTTATTTTCAGCTGGAGCTGTATCAGATAATTCCACAATACCTGCTTTAGTAAACATTGGAGTTCTCTATTCTTTCAATACCAGTGTTGGTAAAATGGTGAAAACTGCTGTAGAAGCGGCGGTTGAAGATGTAAATTCTAATCCATCTATTCTTGCTAAAACTAAGTTGAAGGTCTCAATGCAAGAAGATACCAAATACAGAGGTTTTTTGAGCATTGCTGAGGCCTTGCAGCTCATGTCGACACAGACTGTGGCTATAATTGGCCCCCAGACCTCTACAACAGCTCATGTCATATCTCATATAGCAAATGAACTCCAAGTTCCTCTGCTATCATTTACAGCCACTGACCCTACCCTTTCTTCTCTTCAATTCCCATTTTTTATTAGAACTGCTTTTAGTGACATTTATGAAATGACTGCAATAGCAGACCTTGTTAACTACTTTGAATGGAGAGAGGTTATTGCAGTTTATGGTGATGATGACCATGGGAGGAATGGAATGGGTGCTTTAGGGGATAAGCTTGCGGAGAGGCGTTGCAAGATTTCATTTAAAGCACCTATGACTCCTGAGGCAACTAGGGAGGAGATTACTGATGTACTTGTTCAGGTGGCCTTAGCAGAATCTCGGGTTATAGTTCTTCACACAAGTACTGCTTGGGGCCCAAAAGTGTTAAGTGTGGCAAAGTCTCTGGGGATGATGGAAAATGGGTATGTCTGGATAACAACTACTTTTCTGTCTACTTGGCTGGATATAGGAAGTCCGCTATCTTCAGATTCAACGGATGACATGCAAGGGGTCATTACACTACGTATGTATATACCGGATTCAAAGCTCAAAAGATGGTTTGTTTCTAGGTGGACAAACTTGACTTCTACTGGAAAGACTGGTAATGGTACCCTTGGTTTGAGTACTTACGGTATCTTTGCATATGACACTGTGTTTGCTCTTGCTCATGCCCTTGATACATTTTTCAAACGAGGGAATAAAATTACATTTTCACATGATCCAAAGTTATCTCAACTACGTGGAGACAACATGCATCTTGATGCTGTGAAAATCTTCAACGAGGGAAATCTGTTGCGTAAATATATTTATGAGGTTAATATGACTGGTGTATCAGGTCTATTCAAGTATGCATCTGATGGAAACCTTGTCAATCCAGCGTATGAAATCATCAATGTGATTGGAACAGGAACCCGGAGGATTGGTTATTGGTCTAATTACACTGGATTATCAATTGTTCCTCCAGAAGCACTTTATTCAAAACCACCTAATCGATCCAGTGCAAACCAAAAGCTACTCCCTGTGTTTTGGCCAGGAGAAACAACCCAAAAGCCCCGTGGTTGGGTTTTCCCAAACAATGGAAGGATGTTAAAAATTGGAGTGCCAAAAAGGGTTAGTTACCGGGATTTTGTCTCACAAGTACAAGGCACTGACATGTTCAAGGGATTCTGCATTGATGTTTTTCTTTCTGCAGTGAACTTGTTGCCCTATGCTGTCCCCTATAAATTTGTCTCATATGGGGATGGTGACAGCAATCCTAGTAACACTGAACTTGTCCGACTTATCACAGCGGATGTTTTTGATGCTGCAGTAGGTGACATTACAATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTGGTGGTAGTAGCAGCAGTTAAGAAGACAGATTCCAATGCTTGGGCCTTTTTTACACCATTTACGCCAATGATGTGGACTGTAACTGCTATCTTTTTTCTGTTAGTGGGAGCTGTTGTTTGGATTTTAGAGCATAGGCTGAATGATGATTTTAGGGGACCTCCCAAACAACAAATGGTCACAATTTTGTGGTTTAGTTTTTCGACCATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACTCTTGGTCGCTTTGTGCTGCTTATATGGTTATTTGTAGTTCTAATAATTAACTCAAGTTACACAGCTAGCCTGACATCAATCCTCACTGTGCAACAACTTTCTTCACCTGTTAAAGGCATTGACAGTTTAATAAGTAGCAAAGAGCCTATTGGGTACTTGCAGGGTTCATTTACTCGAACTTATTTGATTGAGGAAATTGGTATTGATGAATCCAGACTAGTTCCTCTAAAAACACCGGAAGAAACTGCAAAAGCACTAAAAAATGGTCCCAAGAAGGGCGGCATTGCTGCATATGTTGATGAGCGTGCTTACATAGAACTTTTCCTTTCAAGCCGGTGCGATTTTAGTATTGTAGGTCAAGAGTTCACCAGGAATGGTTGGGGATTTGCCTTTCCACGAGATTCTCCATTAGCAGTTGATCTTTCAACTGCCATATTGGAGTTGGCAGAGAATGGAGACTTACAAAGGATCCATGACAAATGGCTCTTGAGCAGTGCCTGCCTATCACAAGGTGCAAAGCTTGAAGTTGATAGACTCAAGCTGAGAAGCTTCTGGGGCCTCTATCTGGTGTGTGGGTTGGCATGTGTGCTTGCTCTCCTCATATATCTCATTCAGACCATGAGACAGTACTCCAAGCACCGCCCGGAGGAACTCGAGTCTTCTGGCCACAGCTCAGGATCTTCACGTCTGCGCACATTCCTTTCGTTCGTAGATGAAAAGGAAGAGATTGTCAAGAACCGTACCAAGAGAAAGAAAATTGAGGGCATGTCTTACAGGAGCACAAGTGAGGTAGGATCATCCATCACCTCCAACAAAGGATATTCTCAGGCATCATCAAACAGAATTGATTCAGCTAGTGAAATCTGA 2820 0.4188 MSRVELVVLLVLFEGLFSAGAVSDNSTIPALVNIGVLYSFNTSVGKMVKTAVEAAVEDVNSNPSILAKTKLKVSMQEDTKYRGFLSIAEALQLMSTQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFIRTAFSDIYEMTAIADLVNYFEWREVIAVYGDDDHGRNGMGALGDKLAERRCKISFKAPMTPEATREEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMENGYVWITTTFLSTWLDIGSPLSSDSTDDMQGVITLRMYIPDSKLKRWFVSRWTNLTSTGKTGNGTLGLSTYGIFAYDTVFALAHALDTFFKRGNKITFSHDPKLSQLRGDNMHLDAVKIFNEGNLLRKYIYEVNMTGVSGLFKYASDGNLVNPAYEIINVIGTGTRRIGYWSNYTGLSIVPPEALYSKPPNRSSANQKLLPVFWPGETTQKPRGWVFPNNGRMLKIGVPKRVSYRDFVSQVQGTDMFKGFCIDVFLSAVNLLPYAVPYKFVSYGDGDSNPSNTELVRLITADVFDAAVGDITITTERTKMVDFTQPYIESGLVVVAAVKKTDSNAWAFFTPFTPMMWTVTAIFFLLVGAVVWILEHRLNDDFRGPPKQQMVTILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIDSLISSKEPIGYLQGSFTRTYLIEEIGIDESRLVPLKTPEETAKALKNGPKKGGIAAYVDERAYIELFLSSRCDFSIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLSSACLSQGAKLEVDRLKLRSFWGLYLVCGLACVLALLIYLIQTMRQYSKHRPEELESSGHSSGSSRLRTFLSFVDEKEEIVKNRTKRKKIEGMSYRSTSEVGSSITSNKGYSQASSNRIDSASEI* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01774 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 324 336 - -
Lapu3g01774 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Lapu3g01774 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Lapu3g01774 939 Gene3D - 148 426 - -
Lapu3g01774 939 Gene3D - 783 813 - -
Lapu3g01774 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 882 IPR015683 -
Lapu3g01774 939 Pfam Receptor family ligand binding region 48 411 IPR001828 -
Lapu3g01774 939 Gene3D - 742 782 - -
Lapu3g01774 939 SMART GluR_14 474 815 IPR001320 GO:0015276|GO:0016020
Lapu3g01774 939 Gene3D - 50 401 - -
Lapu3g01774 939 PIRSF IGluLR_plant 1 938 IPR017103 -
Lapu3g01774 939 FunFam Glutamate receptor 584 714 - -
Lapu3g01774 939 SUPERFAMILY Periplasmic binding protein-like I 29 465 IPR028082 -
Lapu3g01774 939 CDD GluR_Plant 471 813 - -
Lapu3g01774 939 MobiDBLite consensus disorder prediction 910 939 - -
Lapu3g01774 939 Pfam Bacterial extracellular solute-binding proteins, family 3 530 813 IPR001638 -
Lapu3g01774 939 FunFam Glutamate receptor 468 584 - -
Lapu3g01774 939 Pfam Ligand-gated ion channel 814 846 IPR001320 GO:0015276|GO:0016020
Lapu3g01774 939 Gene3D - 468 583 - -
Lapu3g01774 939 FunFam Glutamate receptor 148 313 - -
Lapu3g01774 939 SUPERFAMILY Periplasmic binding protein-like II 448 815 - -
Lapu3g01774 939 MobiDBLite consensus disorder prediction 906 939 - -
Lapu3g01774 939 CDD PBP1_GABAb_receptor_plant 33 430 IPR044440 -
Lapu3g01774 939 Gene3D - 584 711 - -
Lapu3g01774 939 FunFam Glutamate receptor 710 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01774 Lapu-Chr3 30055888 30060835 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01774 6 915 Ion Channels AT3G51480 58.488 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01774 K05387 - gmx:100788917 1694.48