Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01768 ATGGCACATGTGATTTCACACATAGCAAATGAGATGCAAGTGCCTCTACTTTCATTTGCAGCAACAGACCCTACACTGACTTCACTGCAGTTCCCATATTTTGTTAGAACAACACAGAGTGATCTGTACCAGATGGCTGCTGTGGCAGAAATTGTTTATCACTTTCAATGGAGAGATGTCATTGCCATTTACGTTGATGATGATCATGGAAGAAATGGTATAGCAGCCTTAGGCGAAAGACTAGCAGAGAAACGTTGCAAAATATCATCTAAAGTACCCTTTAAGCCGGATATAACCCGGGAAGAAATAAACAATGCATTAGTTAAGGTAGCTTTAATGGAGTGTAGGGTAATAGTCATTCACATGTACACTTCTTCTGGTCTAGAAGTACTTCATCATGCGGCTCAGTCAGTTGGCATGATGGGAAGTGGTTATGTGTGGATAGCCACAGATTGGCTTTCTACAATACTAGATTCAGACCCATCCTTGTCAGCATCTCAAGTCATGAATGACATCCAAGGTGTTATCACCTTGCGCATGCATACGCCGGAATCAGACATCAAAACAAAATTTATTTCTAGGTGGGACAAACTCTGCCGAAAAGAAGATCCTAATGAGGAAACTTTTGGATTAAATATCTTTGGTCTCTACGCCTATGACACCGTTTGGGTGCTTGCTTCTGCACTGGATTCATTTTATAAAGATGGGGGAACTTTGTCATTTTCGAATGATTCAAGTCTAAACATGTTAAGAGGGGACACCCTTAATCTTGATACTATGGGGGTCTTTGTTGATGGTGACATGTTGCGTAAAAAAGTTTTAGAAGTGAACAGAACTGGTTTAGCAGGTCAAATGGTGTTTAATCGGGATGGAAACTTAGCGCATCCATCATATGAAATCATTAATGTGATAGGCACTGGAATCAGGAGGATTGGTTATTGGTCAGAAACCTCTGGCCTCCATACTGGGGAAGATCCTAATCACTCAAATTCGAGTGATGGACTGTATGGGGTCATTTGGCCAGGTCAAACAACCCAAACCCCACGTGGATGGGTCTTTTCCAGCAATGGAAGAAGCTTGAGAATTGGTGTGCCACTTAGAATTAGTTACCGTGAGTTTGTGTCAAGAATTGAGGGAACTGAGATGTTTGGTGGTTATTGCATAGATGTGTTTACTGCTGCTCTCAACTTGTTGCCTTATTCGGTACCATTCAAGTTCATTCCATTTGGTGATGGTAAAACCAACCCTTTAAATTCGGATCTTCTTCACATGATAACAATGGGTGCCTTCGATGCTGTGGTGGGAGACATTACCATTACCACCAACCGAACTAAGATAGTGGACTTCACACAGCCATATATTGAGTCTGGGCTAGTTGTTGTGGCACCTATCAAGAAGTTGAAATCCCGTGCTTGGGCTTTCCTAACACCATTCACTCCAATGATGTGGTTTGTGACAGGAATGTTTTTCTTGGTGGTAGGAGCTGTTGTGTGGATTTTGGAGAGACGCATAAATGATGACTTTAGAGGCCCTGCTAGAAGACAATTTGTCACCATCATTTGGTTTAGTTTCTCAACCCTGTTTTTTGCACATAGAGAAAAAACTGTGAGCACCCTAGGTCGCTTAGTGCTTATCATATGGCTGTTTGTGGTTTTGATACTGAACTCAAGCTATATTGCAAGCCTCACCTCCATCCTAACAGTGGAACAGCTCTCTTCACCGGTTAAAGGAATTGAAAGTTTAGTAATAAGCAACGATCGCATTGGTTTCCTGAGGGGTTCATTTGCTGAGAACTATCTGACCGAGGAGCTCAACATACACAGGTCCAGGCTTGTTCCTCTCAACTCACCATCAGAATATGAAAAAGCCTTAAAGGATGGGCCAGCTAATGGTGGTGTTGCTGCAATAATAGATGAACGTGCATATATGGAGCTCTTCCTAGCGACCAGATGTGAATTTGGTATCGTTGGTCAGGAGTTCACCAAGATGGGATGGGGTTTTGGCTTCCCAAGGGAATCTCCCCTATCAATTGATATGTCAACTGCCATCCTTAAACTGTCAGAAAATGGTGACCTCCAAAGAATTCATGACAAATGGCTAACGAGAAGTGCCTGCAGCTCAGAAGGTGCAAAACAAGGCATAGACAGGCTTGAGCTAAAAAGCTTTTGGGGTCTATTCCTACTCAGTGGCATAGCGTGCTTCATTGCTCTCCTTTGTTATGCTATTAGAATGGTTTACCGTTTTAGCAGACACTCAAATAGTAGCCTTGAGCGCTCATCTCACTCTGCTCGTTTTCGATCTTTCCTTACCTTTGTCAATGAAAGAGAAGGGGAAGACAAATACAGGCCAAAGAGAAGGCGAAAAGAGAAGTGTTCTTGTAGAAAGGTAGTGCGTGAAGGTGGATCTTTTGATGACTCAACTGTTACTGTCCACATAGAAAATAATGCCATTGCGCCAGATTAA 2463 0.4251 MAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMAAVAEIVYHFQWRDVIAIYVDDDHGRNGIAALGERLAEKRCKISSKVPFKPDITREEINNALVKVALMECRVIVIHMYTSSGLEVLHHAAQSVGMMGSGYVWIATDWLSTILDSDPSLSASQVMNDIQGVITLRMHTPESDIKTKFISRWDKLCRKEDPNEETFGLNIFGLYAYDTVWVLASALDSFYKDGGTLSFSNDSSLNMLRGDTLNLDTMGVFVDGDMLRKKVLEVNRTGLAGQMVFNRDGNLAHPSYEIINVIGTGIRRIGYWSETSGLHTGEDPNHSNSSDGLYGVIWPGQTTQTPRGWVFSSNGRSLRIGVPLRISYREFVSRIEGTEMFGGYCIDVFTAALNLLPYSVPFKFIPFGDGKTNPLNSDLLHMITMGAFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIKKLKSRAWAFLTPFTPMMWFVTGMFFLVVGAVVWILERRINDDFRGPARRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVISNDRIGFLRGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGPANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFGFPRESPLSIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLSGIACFIALLCYAIRMVYRFSRHSNSSLERSSHSARFRSFLTFVNEREGEDKYRPKRRRKEKCSCRKVVREGGSFDDSTVTVHIENNAIAPD* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01768 820 PRINTS Metabotropic glutamate GPCR signature 60 77 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lapu3g01768 820 PRINTS Metabotropic glutamate GPCR signature 44 60 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lapu3g01768 820 PRINTS Metabotropic glutamate GPCR signature 25 44 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lapu3g01768 820 PRINTS Metabotropic glutamate GPCR signature 462 484 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lapu3g01768 820 PIRSF IGluLR_plant 1 815 IPR017103 -
Lapu3g01768 820 FunFam Glutamate receptor 355 471 - -
Lapu3g01768 820 SUPERFAMILY Periplasmic binding protein-like II 336 702 - -
Lapu3g01768 820 SMART GluR_14 361 702 IPR001320 GO:0015276|GO:0016020
Lapu3g01768 820 FunFam Glutamate receptor 597 704 - -
Lapu3g01768 820 Pfam Bacterial extracellular solute-binding proteins, family 3 419 701 IPR001638 -
Lapu3g01768 820 Gene3D - 471 606 - -
Lapu3g01768 820 Gene3D - 622 707 - -
Lapu3g01768 820 FunFam Glutamate receptor 471 601 - -
Lapu3g01768 820 SUPERFAMILY Periplasmic binding protein-like I 2 351 IPR028082 -
Lapu3g01768 820 Gene3D - 352 470 - -
Lapu3g01768 820 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 758 IPR015683 -
Lapu3g01768 820 Pfam Receptor family ligand binding region 2 305 IPR001828 -
Lapu3g01768 820 CDD GluR_Plant 360 700 - -
Lapu3g01768 820 FunFam Glutamate receptor 40 197 - -
Lapu3g01768 820 Pfam Ligand-gated ion channel 702 733 IPR001320 GO:0015276|GO:0016020
Lapu3g01768 820 Gene3D - 40 320 - -
Lapu3g01768 820 Gene3D - 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01768 Lapu-Chr3 29801026 29805474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01768 1 787 Ion Channels AT1G42540 59.209 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01768 K05387 - gmx:100789442 1454.88