Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01748 ATGGAAATGAGTGGGGAAATAGAAGAGAACGTTAGAGAGTTGAGGAGATACTTCAATACAGGAAAAACTAAGAGTGTAACATGGAGGAAAAACCAGCTCTCAGGTATCTTAGACCTTATTCATGAGAATGAAGATGCTATATTTAAGGCCCTCCATCTAGATCTTGGGAAGCACCCTGTTGAGGCTTTCCGCGATGAGATTGGAGGGGTAGAAAAATCAGCCAGCAAGTCTTTGAGCTGCGTTGAGAAATGGATGACTCCTAAAACGAGTGATATCCCTTTGCTTTTCTTTCCAGCTAAAGGAGAAGTGTTGTCAGAACCCCTTGGTGTGGTGCTCATATTTTCTTCTTGGAACTTTCCTATCATGCTGGCATTGGATCCATTAATTGGGGCAATATCTGCTGGAAATGTTGTAGTCATAAAACCTTCAGAGCAAGCTCCAGCTTGCTCTTCTTTCCTTGCCAATACCATTCCTCGCTACTTGGACTCTAATGGCATCAAGGTGATTGAGGGTGGAGCAAATGTTTGTGAGCAACTACTGCTACAAAAATGGGACAAAATATTCTTCACTGGAAGTCCACGTGTGGCAAGCATAGTCATGTCTGCTGCTGCAAAGAATTTAACTCCTGTTACTCTAGAGTTGGGTGGAAAATGCCCTGCCATACTTGATTCCCTTCCCAATCCTTCAGAATTTAAGTTGGCAGTCAAAAGAATTGTGGGAGGAAAGTGGGGACCTTGCAGTGGACAAGCTTGCATAGGAATAGACTATTTGCTTGTTGAGGAGAAGTTCTCATCTTCTCTGATAGAGCTATTAAAGAAGATAATCAGAAGATTTTATGGTGAAAACCCAGTGGAGTCAAATGTAATTTCGAGAATAGTGAACAAACATCACTTTGAGAGAATACGAAATCTTCTCAAAGACCCTCTTGTTGCTGCATCCATCGTTCATGGTGGTTTGATCGATGAAGAAAACCTGTTCATTGAGCCTACAATCTTATTAGATCCTCCACTAGATTCTCAGATAATGACAGAAGAAATATTTGGTCCACTGCTTCCTATAATCACACTGAATAAAATTCAAGAAAGCATTGAATTTATCATTGGAAAACCGAAACCTCTTGTTATTTATGCCTTCACCAAAGATGAAACTTTCAAGAGAAAAATTCTATCAGAAACATCTTCAGGAAGTGTCATATTTAATGACGCCTTGGTTCAATTTTTATGTGATACGCTACCATTTGGAGGTGTTGGCCAGAGCGGTTTTGGAAGGTACCATGGGAAGTACTCTTTTGACACTTTCAGCCATGAAAAGGCAGTAATGCATAGAAAGCTATTCCTTGAAATTGAGCCAAGGTACCCTCCTTGGACTAAGTTCAAGCTAGAGTTTATTAGACTGGCATACAGGCTGAACTACTTTGGACTATTACTGCACATGATGGGCTTCAAACTCGGCTTGAAAAGATACGACTAG 1470 0.4075 MEMSGEIEENVRELRRYFNTGKTKSVTWRKNQLSGILDLIHENEDAIFKALHLDLGKHPVEAFRDEIGGVEKSASKSLSCVEKWMTPKTSDIPLLFFPAKGEVLSEPLGVVLIFSSWNFPIMLALDPLIGAISAGNVVVIKPSEQAPACSSFLANTIPRYLDSNGIKVIEGGANVCEQLLLQKWDKIFFTGSPRVASIVMSAAAKNLTPVTLELGGKCPAILDSLPNPSEFKLAVKRIVGGKWGPCSGQACIGIDYLLVEEKFSSSLIELLKKIIRRFYGENPVESNVISRIVNKHHFERIRNLLKDPLVAASIVHGGLIDEENLFIEPTILLDPPLDSQIMTEEIFGPLLPIITLNKIQESIEFIIGKPKPLVIYAFTKDETFKRKILSETSSGSVIFNDALVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVMHRKLFLEIEPRYPPWTKFKLEFIRLAYRLNYFGLLLHMMGFKLGLKRYD* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01748 489 PANTHER ALDEHYDE DEHYDROGENASE 3 479 IPR012394 GO:0006081
Lapu3g01748 489 SUPERFAMILY ALDH-like 6 454 IPR016161 GO:0016491
Lapu3g01748 489 FunFam Aldehyde dehydrogenase 15 219 - -
Lapu3g01748 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Lapu3g01748 489 FunFam Aldehyde dehydrogenase 216 419 - -
Lapu3g01748 489 Pfam Aldehyde dehydrogenase family 6 439 IPR015590 GO:0016491
Lapu3g01748 489 PIRSF ALDH 1 480 IPR012394 GO:0006081
Lapu3g01748 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01748 Lapu-Chr3 28615040 28619478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01748 3 482 Aldehyde Dehydrogenase Gene Family AT4G36250 61.458 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01748 K00128 - gmx:100809812 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01748 3 28615040 28619478 Lapu3g01748 3 28615040 28619478 ECH