Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01734 ATGAGAAAGATTTGGCTTCTTGTCCTTGTGATGTTCTACCATGGCTTTCCTTCGAAGGGAATCAACAGTGTTTCTACGAGGCCAAGTACCGTTAACGTTGGCGCCCTTATGTCCTTCAATTCGACAGTTGGGAGAGTGGCTAAAGTTGCTATAGAAGCTGCAGTGGATGATGTAAACTCAAATGCAGCTATTCTTAATGGAACCAAGCTTAAGATTTTAATGTTGGATACCAAATTATCCACTGGGTTCCTAGGAATCGTTGACTCATTAAGATTGATGGAGAATGACACTGTGGCCATAATTGGTCCCCAGTTCTCAGTGATGGCTCATGTGATTTCACATATTGCAAATGAGATGCAGGTCCCTCTCCTTTCCTTTGCAGCGACAGACCCGACACTGACTTCATTGCAGTTCCCATATTTTGTTAGGACAACACAGAGCGATCTGTATCAGATGACTGCTGTGGCGGAAATTGTTGATCACTTTCAATGGAGAGATGTCATAGCTATTTACATTGATGATGATCATGGAAGAAATGGGGTGTCTTCTTTAGGGGATAAACTAGCAGAGAAACGTGGTAAAATATCACACAAAGCACCGTTTAAGCCTGGTAACATTACTCGGGAAGAAATAAACAGTGCATTAGTTAAGATAGTTTTAATGGAGTCAAGGGTAATAGTACTTCACATATACCCTTCTTTTGGTCTAGATGTATTGAATGTGGCTCGGTCACTTGGCATGATGGGAAGTGGCTATGTCTGGATAGCCACAGATTGGCTTTCTACACTATTAGATTCAAACCCGTCATTGTTCACCACTCAATCCATGAATGATATCCAAGGTGTTATCACCTTGCGTATGTATACCCCTGAGTCAGAAATCAAAAGAAAATTTAGTTCTAGTTGGAACAAACTGAGCAAGGAAAAGGATCCTGTTGAGGGTCCTTTCGCATTGAACACCTTTGGCTTTTACGCCTATGACACTGTTTGGGTGCTTGCTTCTGCACTCGATGCGTTTTTTAGGAGTGGGGGAACTTTGTCGTTTTCAAATGATTCAAGTCTAAACATGTTAAGGGGGGACACTCTTCACCTTGATACTATGGGAGTTTTTCTTGATGGTGGCAAGCTGCTTCAAAAAATTTTAGAGGTGAACAGAACTGGTCTAACAGGCCAAATGATGTTTGGTCAAGATGGAAACTTAGTGCACCCATCATATGAAGTCATTAATGTTATAGGCACTGGAATTAGGAGGATTGGTTATTGGTCTGAAACTTCTGGCCTCCACACTGGGGAGGCTCCTAATCATTCCATTTCTAGTGAAGCACTATATGGTGTCATCTGGCCTGGTCAAACAACTCAAACCCCACGTGGATGGGTTTTTTCCAGCAACGGAAGAAACTTGAGAATTGGGGTGCCACTTAGAATTAGTTACCGTGAGTTTGTGTCAAGAACTGAGGGAACTGAGATGTTTGGTGGATATTGCATAGATGTGTTCACTGCTGCTCTCAACTTGTTGCCTTATCCCGTTCCCTACAAACTTTTTCCATTTGGAGATGGTAAAACCAACCCACCAAATACAAAACTTCTCAACATGATCACTATTGGGGAATTCGATGCTGTTGTGGGGGACATCACTATTACCACAAACCGAACCAAGATAGTGGATTTTACACAGCCATATATTGAGTCTGGGCTAGTTGTTGTGGCACCTATAAGGAAGATGAAATCCAGTGCTTGGGCTTTCCTGAGACCATTCACTCCAATGATGTGGTTTGTGACAGGAATGTTTTTCTTAGTTGTGGGAGCTGTTGTATGGATTTTGGAACGTCGCTTAAATGATGACTTCAGAGGCCCAGCTAGAAGGCAGTTTGTAACCATTATATGGTTTAGCTTCTCAACCCTGTTTTTTTCTCATCGAGAGAAAACTGTGAGCACCCTTGGTCGCTTAGTGCTGATCATATGGCTGTTTGTGGTTTTGATACTGAACTCAAGCTATATTGCAAGCCTCACCTCCATCCTAACAGTGGAACAGCTCTCTTCCTCAGTTAAGGGAATTGAAAGTTTAGCAACAAGCGATGAACGCATTGGTTTCCTGAGTGGATCCTTTGCTGAAAATTATCTGACAGAGGAGCTAAACATACATAGATCAAGGCTTGTTCCTCTCAACTCCCCATCAGAATATGAAAAGGCCTTGAAAGATGGCCCTGCTAATGGAGGTGTCACTGCCATAATAGATGAACGTGCATACATGGAACTCTTCCTGGCTACCAGATGTGAATACGGTATTGTTGGGCAAGAGTTCACCAAGATGGGATGGGGCTTTGCCTTCCCAAGAGATTCTCCCCTAGCAATTGACATGTCAACCGCCATCTTAAAACTTTCAGAGAATGGTGATCTTCAGAGAATTCATGACAAATGGCTATCAAGAAGTGCATGTAGCTCAGAGGGTGCAAAACAAGGCATAGACCGTCTTGAGCTAAAAAGCTTTTGGGGTCTGTTCCTTCTTAGTGGCATATCATGCTTCATTGCTCTCCTTTGCTATGTTGCAAGGATGGCCTACCGTTTTAGTAGACTCTCCAGCAGTAACTCAAAAGGCTCATCACACTCCGCTTGTCTTCGATCATTCTTTACCTTTGTGAATGAAAGAGAAGAAGAAAAAAATACATCAAAGACAAAACGAACCGAAAAGGGATCTAGTGGAAGGGTGGCGCATGAAGAAGAATTTGATGGCTCAAGTGTTGGTGTGCATATTGAAAATTAG 2760 0.4257 MRKIWLLVLVMFYHGFPSKGINSVSTRPSTVNVGALMSFNSTVGRVAKVAIEAAVDDVNSNAAILNGTKLKILMLDTKLSTGFLGIVDSLRLMENDTVAIIGPQFSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMTAVAEIVDHFQWRDVIAIYIDDDHGRNGVSSLGDKLAEKRGKISHKAPFKPGNITREEINSALVKIVLMESRVIVLHIYPSFGLDVLNVARSLGMMGSGYVWIATDWLSTLLDSNPSLFTTQSMNDIQGVITLRMYTPESEIKRKFSSSWNKLSKEKDPVEGPFALNTFGFYAYDTVWVLASALDAFFRSGGTLSFSNDSSLNMLRGDTLHLDTMGVFLDGGKLLQKILEVNRTGLTGQMMFGQDGNLVHPSYEVINVIGTGIRRIGYWSETSGLHTGEAPNHSISSEALYGVIWPGQTTQTPRGWVFSSNGRNLRIGVPLRISYREFVSRTEGTEMFGGYCIDVFTAALNLLPYPVPYKLFPFGDGKTNPPNTKLLNMITIGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKMKSSAWAFLRPFTPMMWFVTGMFFLVVGAVVWILERRLNDDFRGPARRQFVTIIWFSFSTLFFSHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSSVKGIESLATSDERIGFLSGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGPANGGVTAIIDERAYMELFLATRCEYGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGAKQGIDRLELKSFWGLFLLSGISCFIALLCYVARMAYRFSRLSSSNSKGSSHSACLRSFFTFVNEREEEKNTSKTKRTEKGSSGRVAHEEEFDGSSVGVHIEN* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01734 919 FunFam Glutamate receptor 147 305 - -
Lapu3g01734 919 Pfam Bacterial extracellular solute-binding proteins, family 3 524 808 IPR001638 -
Lapu3g01734 919 SUPERFAMILY Periplasmic binding protein-like I 27 458 IPR028082 -
Lapu3g01734 919 CDD PBP1_GABAb_receptor_plant 32 427 IPR044440 -
Lapu3g01734 919 CDD GluR_Plant 467 807 - -
Lapu3g01734 919 SMART GluR_14 468 809 IPR001320 GO:0015276|GO:0016020
Lapu3g01734 919 MobiDBLite consensus disorder prediction 886 913 - -
Lapu3g01734 919 FunFam Glutamate receptor 462 578 - -
Lapu3g01734 919 Gene3D - 147 427 - -
Lapu3g01734 919 FunFam Glutamate receptor 578 708 - -
Lapu3g01734 919 FunFam Glutamate receptor 704 811 - -
Lapu3g01734 919 Pfam Ligand-gated ion channel 809 839 IPR001320 GO:0015276|GO:0016020
Lapu3g01734 919 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Lapu3g01734 919 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 325 337 - -
Lapu3g01734 919 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Lapu3g01734 919 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 880 IPR015683 -
Lapu3g01734 919 Gene3D - 49 402 - -
Lapu3g01734 919 Gene3D - 465 577 - -
Lapu3g01734 919 Gene3D - 578 712 - -
Lapu3g01734 919 Gene3D - 725 814 - -
Lapu3g01734 919 MobiDBLite consensus disorder prediction 886 919 - -
Lapu3g01734 919 Pfam Receptor family ligand binding region 49 412 IPR001828 -
Lapu3g01734 919 PIRSF IGluLR_plant 1 913 IPR017103 -
Lapu3g01734 919 SUPERFAMILY Periplasmic binding protein-like II 442 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01734 Lapu-Chr3 27613038 27616906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01734 1 895 Ion Channels AT1G42540 57.407 0.0 1059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01734 K05387 - gmx:100790502 1650.57