Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01725 ATGTCCGCGGAAGCGTCCAAGCGCTACCAATGGGAGTGGGACAACGCTACCGCCGGCGCCGTCGCTGGATTCGCCACCGTCGCCGTTATGCATCCCCTTGACGTTGTTCGAACTAGATTCCAAGTTAATGACGGTCGAGTCTTGCATCTTCCCAGTTACAAGAACACTGCTCACGCCATTTTCACCATTGCTCGCTCCGAGGGACTAAGAGGGTTATATGCAGGCTTTCTTCCTGGGGTTCTTGGGTCTACCATTTCATGGGGTTTATATTTCTTTTTCTATGACAAAGCCAAACAAAGATATGCAAGGAACAGGGAGGGGAAGTTGAGCCCAGGCCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTTTGCTTGTGCACAAATCCTGTCTGGCTAGTAAAGACAAGATTGCAGCTTCAAACTCCACTTCATCAGACACGTCCATACACTGGGATTTATGATGCATTTAGAACCATAATGAGGGAGGAAGGATTTAGTGCACTTTACAGAGGGATTGTTCCTGGTCTATTTCTGGTTTCTCATGGTGCTATTCAGTTCACAGCATATGAGGAACTACGTAAAGTTATTGTTGATTTTAAAAGTAAGAGAAGTACAGTACATAATCAAAACCCTGATAAATTGCTGAATTCTGTTGATTATGGTGTTCTTGGAGCAACATCAAAACTTGCAGCGATACTGGTAACCTATCCATTTCAGGTTATGCGAGCCCGATTGCAGCAACGACCTAGTGGTGATGGGGTTCCAAGATATATGGACACTTGGCATGTTGTGAAAGAAACGGCACGATTTGAAGGTGTCCGAGGTTATTACAAAGGAATTACCGCAAACCTGTTGAAGAATGCTCCTGCTTCTTCAATAACATTTATTGTGTATGAAAATGTTCTAAAACTGCTTAAACCGACTAGAAGGAATGACTGA 945 0.4466 MSAEASKRYQWEWDNATAGAVAGFATVAVMHPLDVVRTRFQVNDGRVLHLPSYKNTAHAIFTIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREGKLSPGLHLASAAEAGGLVCLCTNPVWLVKTRLQLQTPLHQTRPYTGIYDAFRTIMREEGFSALYRGIVPGLFLVSHGAIQFTAYEELRKVIVDFKSKRSTVHNQNPDKLLNSVDYGVLGATSKLAAILVTYPFQVMRARLQQRPSGDGVPRYMDTWHVVKETARFEGVRGYYKGITANLLKNAPASSITFIVYENVLKLLKPTRRND* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01725 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Lapu3g01725 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Lapu3g01725 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 309 IPR044712 GO:0006862|GO:0055085
Lapu3g01725 314 FunFam Folate transporter 1, chloroplastic 106 312 - -
Lapu3g01725 314 Gene3D Mitochondrial carrier domain 1 107 IPR023395 -
Lapu3g01725 314 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
Lapu3g01725 314 Pfam Mitochondrial carrier protein 222 308 IPR018108 -
Lapu3g01725 314 Pfam Mitochondrial carrier protein 13 104 IPR018108 -
Lapu3g01725 314 Gene3D Mitochondrial carrier domain 108 311 IPR023395 -
Lapu3g01725 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Lapu3g01725 314 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Lapu3g01725 314 SUPERFAMILY Mitochondrial carrier 13 302 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01725 Lapu-Chr3 27207993 27217061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01725 32 307 Chloroplast and Mitochondria Gene Families AT2G47490 38.489 2.06e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01725 K15115 - gmx:100809599 575.859