Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01648 ATGTTGAATCTGTTGATGAGAGAAGAGGTACTATTGTTAGTGCAGAACTGTTATCATATAATCTTGGCCGCATTATTCACTATAGGAGTAACATATTTCGCCTCAAAAGCTTGGAAAAGAGATACAACAAACAATAGAGAAGAAATTCCCGGCAGGTTGGGACTGCCTTTTGTTGGGGAAACTTTTTCTTTTCTTTCAGCCACTAATAGCACAAGGGGATGCTATGATTTTGTCAGACTTAGGCGATTGTGGAATGGGAGATGGTTCAAGACAAGGTTATTTGGGAAGATCCACATATTTGTTCCCAATCCTGAAGGAGCAAGGACCATATTTGGTAATGACTTTGTTCTATTCAACAAGGGTTATGTGAAATCAATGGCAGATGCGGTGGGAGAGAAAAGCCTGTTATGTGTACCCGTTGAGAGTCATAAAAGAATAAGGCGTCTTTTATCAGAACCATTCTCCATGACTTCCCTATCCGTATTTGTCACCAAATTTGACAAACTGTTGTGTGGAAGGCTGCAAAAGCTAGAAGAAAACGGGAAAAGTTTCAAGGTGTTGGACTTTTGTATGAAGATGACATTTGATGCAATGTGTGATATGCTGATGAGCATCACGGAGGATTCATTACTCCAACAGATCGAAGAAGACTGCAACGCCATCTCTGACGCCATGTTATCCATTCCCATCATGATTCCTCGTACCAGATACTATAAAGGCATCACGGCTCGTAAAAGGCTCATGGAGACCTTCAGAGAGATCATTGCCAGACGTAGGAGGGGAGAAGAAACTTCAGAGGACTTCCTTCAGTCCATGTTGCAGAGAGACTCACTCCCAGCCAGTGAAAAACTTGACGACTCGGAGATTATGGATAATCTGCTGACATTGATAATTGCTGGACAAACAACCACAGCAGCAGCAATGATGTGGAGTGTAAAGTTTCTACATGACAACAGAGAAGCACAGGACATACTCAGGGAAGAACAGTTATCTATAACCAAAATGAAACCAGACGGAGCTTCAATTAACCATGAAGATCTAAACAACATACGTTATGGTTTGAAGGTAGTCAAGGAAACATTGAGAATGTCCAATGTCCTGCTATGGTTTCCTCGTGTCGCACTTCAAGACTGCACGATCGAAGGCTATGACATAAAGAAAGGTTGGCATGTTAACATCGATGCAACTTACATACATCACGACTCTGATTTGTACAAGGATCCGTTGAAATTCAACCCACAAAGATTTGATGAAATGCAAAAGCCGTACAGTTTCATACCTTTTGGATCAGGGCCTAGGACATGCCTTGGGATCAATATGGCGAAAGTGACAATGCTAGTCTTTTTACACAGGCTCGCTGGTGGTTATACGTGGACCCTTGATGATTTAGACACTTGCTTAGAAAAGAAAGCACACATACCTAGGCTAAGGAGCGGTTGCCCAATAACTTTGAAGTCCTTGAGCAAAACCATGCTAGAGGCATAA 1485 0.4202 MLNLLMREEVLLLVQNCYHIILAALFTIGVTYFASKAWKRDTTNNREEIPGRLGLPFVGETFSFLSATNSTRGCYDFVRLRRLWNGRWFKTRLFGKIHIFVPNPEGARTIFGNDFVLFNKGYVKSMADAVGEKSLLCVPVESHKRIRRLLSEPFSMTSLSVFVTKFDKLLCGRLQKLEENGKSFKVLDFCMKMTFDAMCDMLMSITEDSLLQQIEEDCNAISDAMLSIPIMIPRTRYYKGITARKRLMETFREIIARRRRGEETSEDFLQSMLQRDSLPASEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDNREAQDILREEQLSITKMKPDGASINHEDLNNIRYGLKVVKETLRMSNVLLWFPRVALQDCTIEGYDIKKGWHVNIDATYIHHDSDLYKDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGINMAKVTMLVFLHRLAGGYTWTLDDLDTCLEKKAHIPRLRSGCPITLKSLSKTMLEA* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01648 494 CDD CYP90-like 79 484 - -
Lapu3g01648 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Lapu3g01648 494 Pfam Cytochrome P450 53 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 SUPERFAMILY Cytochrome P450 45 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 PANTHER CYTOCHROME P450 26 49 459 - -
Lapu3g01648 494 Gene3D Cytochrome P450 39 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01648 494 FunFam cytochrome P450 90A1-like isoform X1 39 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01648 Lapu-Chr3 21503491 21507863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01648 20 459 Cytochrome P450 AT1G19630 44.270 4.54e-126 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01648 - - gmx:100789430 915.99