Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01642 ATGTCAGACTCACACCTGACTTTCTGTTTTCTTTCTTCCATCCTTGCTCTTATAGCCATCACCTTCATTTTCGCCAAAAGAAAGAAACCAAACTTTAATCTTCCCCCTGGCCAAATGGGGTGGCCCCTTATTGGGGAAACCATAGGGTATTTGAAGTCTTACCAAGCTCTTACACTAGGAGAGTTTATGGAGAAGCACATAGCAAGGTATGGTACAATTTACAAGTCAAACTTGTTTGGGGAGCCAGCCATAGTGTCAGCAGATGCAGGGCTGAATAGGTTCATATTGCAGAATGAAGGGAAGTTGTTCGAGGCTAGTTATCCTAAGAGCCTTGGGGGAATACTTGGGAAATGGTCTATGTTGGTCTTAGTAGGGGACATGCACAGAGACATGAGGAACATATCACTCAACTTTCTCAGCCATAACAGGATCCGAACTCTCCTAGTCAAAGACGTCGATAAGCATGCCCTTCTTGTTATTTCCTCGTGGAAACATAATTCTACAGTCTCAGCTCAACATGAAGCAAAAAGGTTCACCTTCAATTTAATGGCGAAACATATCATGAGTCTGGATCCTGAGAAAGTCGAGACAGAACAATTGAAGACAGAATACGTGTGTTTCATGAAGGGTGTTGTATCTCTTGTTCCTTTGAATTTGCCCGGAACAGCATACAGGAAAGCATTAAAGTCTAGGAACACCATTCTGAAGTTCATAGAGGCGAAAATGGAAGAGAGGGCCAAGAGGGTCCAAAAGGGTGACGCATTGGAGGAAGATAGTGATCTTCTAAACTGGGTTTTGAGTCATACAAATCTTTCAACTGAGCAAATACTTGACTTGATATTGAGCTTGCTCTTTGCTGGCCATGAAACCTCATCGGTAGCCATATCTCTAGCTATTTACTTCTTGACCGGTTGTCCTCGAGCTATACAACAATTAAGGGAGGAACACGTGGAAATAGTCAATTCCAAGAAGAAGACAGGGGAGGTTGAATTGACTTGGGATGATTACAAAAAAATGGAGTTTACTCATTGTGTTTTGAACGAAACACTTCGACTGGGGAATGTTGTGAGGTATCTTCACAGGAAGGCTATTAAGGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTTCTTCCGGTGATTTCAGCTGCGCATTTGGATCCTGAACTTTTTGACCAACCTCACCAATTCAATCCATGGAGATGGAAGGGCATTAATAAAAGTGATACCTTCATGCCATTTGGAGGAGGATCAAGGTTGTGTGCAGGATCAGAGTTAGCCAAGGTTGAAATGGCCGTGTTCATCCACCATCTCATCCTCAACTACAACTGGGAAATTCTTGAAGGGGATCAACCTTTTGTATACCCTTATGTCGATTTCCCCAAAGGTCTTCCCATCAAAGTTCAAACCCACTCTTCTACATGA 1434 0.4282 MSDSHLTFCFLSSILALIAITFIFAKRKKPNFNLPPGQMGWPLIGETIGYLKSYQALTLGEFMEKHIARYGTIYKSNLFGEPAIVSADAGLNRFILQNEGKLFEASYPKSLGGILGKWSMLVLVGDMHRDMRNISLNFLSHNRIRTLLVKDVDKHALLVISSWKHNSTVSAQHEAKRFTFNLMAKHIMSLDPEKVETEQLKTEYVCFMKGVVSLVPLNLPGTAYRKALKSRNTILKFIEAKMEERAKRVQKGDALEEDSDLLNWVLSHTNLSTEQILDLILSLLFAGHETSSVAISLAIYFLTGCPRAIQQLREEHVEIVNSKKKTGEVELTWDDYKKMEFTHCVLNETLRLGNVVRYLHRKAIKDVRYKGYDIPCGWKVLPVISAAHLDPELFDQPHQFNPWRWKGINKSDTFMPFGGGSRLCAGSELAKVEMAVFIHHLILNYNWEILEGDQPFVYPYVDFPKGLPIKVQTHSST* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01642 477 CDD CYP90-like 66 471 - -
Lapu3g01642 477 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 Gene3D Cytochrome P450 24 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 SUPERFAMILY Cytochrome P450 31 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01642 477 PANTHER CYTOCHROME P450 26 32 455 - -
Lapu3g01642 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Lapu3g01642 477 FunFam Cytochrome P450 90B1 24 473 - -
Lapu3g01642 477 Pfam Cytochrome P450 35 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01642 Lapu-Chr3 21324576 21328788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01642 26 410 Cytochrome P450 AT3G50660 70.197 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01642 K09587 - gmx:100800210 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01642 3 21324576 21328788 Lapu3g01642 3 21324576 21328788 ECH
Lapu2g00666 2 5863275 5868337 Lapu3g01642 3 21324576 21328788 PCT