Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01634 ATGAGAGTTCCCTCATCCCCACAGCCCAACAACCATTCTCCCAACCCAAACCTCCTCCTCCACACCCTCCCCAACACCACCAACCCCACCTTCACCTACGAACCCACCTCCGTCCTCGACCTCTGCCGCAGCCCCAGCCCCGAAAAGAAACCAACTGTCCCCAAGCCAGAACCACAACACAACAACAACATCACCACCACCGCCACCGCCGCCAATACCAACAACAACAACCTAGACCTGGACGATCATGTCTTGCCGAATTCCGATTGGTGGGAGTCCATCATGAAGGACCTAGCCTTACCCGAAGATTCTCCCACACCCCTTTCCAAGCCTAACAACATCAACCCATGCATCCCTGATTTTCCACCTTCTCACGATCCACCCTTTGATCACCCTCCAGACTTCACCTCGCTTTCAGAAATTTACAACCAAAACCTCCCCTACAACTACACCACCACCAACGCTTTGGACCATTCCTTTCACGACCTCAACCACCACCACCACAACGCCACCAACAACCTTAACAACAATTGGGACTTCATCGAAGAGCTTATCCGGGCCGCCGATTGCTTCGACAGCAGCCACTTCCAACTTGCTCAAGCCATACTCGAACGTCTCAACAACCGCCTCATTCGCTCACCCATGGCCAAGCCCCTCCACCGAGCCGCGTTTCACTTCAAAGACGCTCTCCACTCTATTCTCTCCGGCTCCAACCGTGCCGGTTCCAACCGGCTCTCCTCCATGGCCGAGATTGTTCAAACCATCAAAACGTTCAAGGCCTTTTCCGGAATCTCTCCCATCCCAATGTTCTCTATCTTCACCACCAACCAGGCCTTGCTCGAAACCCTAAACGGATCCTCTTTCGTCCACGTCATCGATTTTGACATCGGGCTCGGAATCCAATACGCCTCTCTCATGAAAGAGATCGCCGATAAGGCGGCACCCGCCTCGCTGCTCCTCCGCATCACCGCAGTCGTGCCAGAGGAGTACGCCGTCGAGAGCCGCCTCGTCCGCGAGAATCTCAACCAGTTCGCCCACGACCTCGGGATTCGCGCGCAGGTAGACTTCGTTCCGGTTCGGACCTTCGAGGCGGTGTCGTTCAAGGCTGTAAGGTTCGTCGAAGGCGAGAAGATCGCGGTGCTGCTGTCGCCGGCGATCTTCTGCCGCCTCGGATCCGGCGGTGCCAGCGTCGGCCCGTTCCTTGCGGACGTGAGGAGGATGGCGCCCGGAGTGGTGGTGTTCGTTGACGGCGAGGGTTGGACGGAGGCTACCGCTGCGACGTCTTTCCGGCGCGGCGTGGTGAACAGCTTGGAGTTTTACTCGATGATGCTGGACTCGCTGGATGCGTCTGTTGCGGCGGGGGGAGGCGGGGAGTGGGTGAGGAGGATCGAGATGCTTCTGCTGCGGCCGAAGATCTTCGCAGCGGTGGAAAGCGCAAGGAGGAGGACGCCACCGTGGAGGGAGGCATTTTACGGCGCCGGAATGAGGCCGGTGCAGCTGAGCCAGTTCGCCGATTATCAAGCGGAATGTTTGCTGGCGAAGGTGCAAATCAGAGGTTTCCACGTGGACAAACGGCATGCTGAGTTGGTGCTGTGCTGGCACGAACGAGCCATGGTTGCCACGTCAGCTTGGCGGTGCTAG 1641 0.5789 MRVPSSPQPNNHSPNPNLLLHTLPNTTNPTFTYEPTSVLDLCRSPSPEKKPTVPKPEPQHNNNITTTATAANTNNNNLDLDDHVLPNSDWWESIMKDLALPEDSPTPLSKPNNINPCIPDFPPSHDPPFDHPPDFTSLSEIYNQNLPYNYTTTNALDHSFHDLNHHHHNATNNLNNNWDFIEELIRAADCFDSSHFQLAQAILERLNNRLIRSPMAKPLHRAAFHFKDALHSILSGSNRAGSNRLSSMAEIVQTIKTFKAFSGISPIPMFSIFTTNQALLETLNGSSFVHVIDFDIGLGIQYASLMKEIADKAAPASLLLRITAVVPEEYAVESRLVRENLNQFAHDLGIRAQVDFVPVRTFEAVSFKAVRFVEGEKIAVLLSPAIFCRLGSGGASVGPFLADVRRMAPGVVVFVDGEGWTEATAATSFRRGVVNSLEFYSMMLDSLDASVAAGGGGEWVRRIEMLLLRPKIFAAVESARRRTPPWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVDKRHAELVLCWHERAMVATSAWRC* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01634 546 MobiDBLite consensus disorder prediction 1 29 - -
Lapu3g01634 546 ProSiteProfiles GRAS family profile. 171 545 IPR005202 -
Lapu3g01634 546 Pfam GRAS domain family 181 545 IPR005202 -
Lapu3g01634 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 169 540 IPR005202 -
Lapu3g01634 546 MobiDBLite consensus disorder prediction 42 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01634 Lapu-Chr3 21110306 21112520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01634 77 545 GRAS Transcription Factor Family AT4G36710 52.024 1.90e-157 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu3g01634 GRAS 2.4e-83 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01634 - - gmx:100785004 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01634 3 21110306 21112520 Lapu3g01634 3 21110306 21112520 ECH
Lapu2g00646 2 5670367 5672541 Lapu3g01634 3 21110306 21112520 PCT