Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01602 ATGTTTCACCACAACACAAACTTCGCAGTGCTTCTTACCATCTTCGTGTTCTGTTCAACGATCGCAGCAACCAACAGCAACTGCACGCGCAGTTGCGGACAACATTTCCTGCAATACCCTTTTGGGTTCTCTTCTGGCTGCAAAGTCAAACTAAACTGCAGCAATGACAACATCAAAGTCAAAATCGGCGAGTTTGAGGTTCAGAATATAACCTCTGATAGCATATTCGTGAGTCTTCCGGTCAAGTGCAACCGCAGCATGGGAGTCATAGACCCTCTTTTCGGTGACAACTTTGCTCCTACGTTCAACAATAGTTTTCTGTTGCAGGGTTGCAATTCCAAGCCCGGTGGCTGCGATATTTCCTCATCGAGTTTCATTGGCGACCACAACCAGGTTGAGGGATGTGTCCGGAAAAACAGAAGTGAAGATTTTATTTGCTTCAAGCAGTTGCAGCGTAATAGTTCGCGTGACGATGTGATCACGCAACGACATTTGAAGGGAATTGGGTGTAGCTTCTTGTTCTCTGCCATCGCTTATGATAAGAGTAAAGAGAAAGAGCTTTCTCTCCAATTACAGATGCTGGAGTTGGGGTGGTGGATTAAAGGGCAGTGCCATTGCTCTAACAATGCATCCTGCATGGAGGTCAACCTTGGCAGAGAAGAACGAGGCTACCGGTGCCAGTGCCATGAAGGTTTCGTCGGCGACGGTTTCAAAGACGGCGATGGTTGCCGGAGTATTCCTCAATGCAAAGCTTCAACACTACGGTCTGGCGGATGTAGAAAAGCAATCAAAATTGGTGTCCTTATTGGAGGGTTCATAATTGCGGCTATCCTGGTGGGTGCTCTGTCTCTTCTATGTTACTTTACTAGGCGTCGTTCCTCTTGGCTGAGAAGACAAATGACAGTAAAGCGCCTATTACGAGAAGCTGCGGGCGACTCTACTGTTCCTCTATATCCCTATAAAGAAATAGAAAGAGCCACAAGTTTTTTCGACGAAAAACATAGGCTGGGAACTGGGGCTTTTGGCACAGTTTATGCTGGACACCTTCACAATGATGAGTGCGTTGCTATAAAAAAGATTAAGTATAGAGACACCAACAGTGTTGACCAAGTCATAAACGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAACTTAGTGCGCCTCCTAGGTTGTTGCATTGAAGGGGGAGAGCAGATACTTGTGTATGAGTATATGCCCAATGGAACACTATCTCAACATTTGCAGAGAGAGAGGGGTGGAGTACTTCCATGGACAGTAAGACTCACCATTGCTACTGAAACTGCTAATGCTATAGCATACCTCCATTCTGCAATTAACCCTCCAATATATCACAGAGACATAAAATCCAGTAACATACTCTTGGACTACAGTTTTCAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATGTCAGAAACATCACATATCTCAACTGCCCCACAAGGGACCCCGGGCTATGTTGATCCCCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAGTAACTGCCATGAAAGTGGTTGATTTTTCGCGACCTCAAAGTGAAATCAATTTGGCTGCACTTGCTGCTGAAAGGATTAGGAGGGGTTGTCTTGATGACATCATTGATCCCTTCCTTGAGCCACATAGGGATGCTTGGACACTCTATTCTGTTCACAAGGTGTCTGAGCTTGCATTTAGATGCCTCGCTTTTCATAGTGACATGAGGCCTACCATGATTGAAGTAGCTGAGGAGCTTGAACTTATTAGACGCAGGGAGTGGGAAACTATGGAGGAAACCATATGCACAGCTTCATCGGTTGGGTCCGTGTGTTCATCGCCTCGAATAGGAAGAGAGAATTCACTAGGAGGCGTTAGTTTTGAGGGAGTTGCAGGGCAAGGGAGTGAGACATTGAGTGTTTCACCCAAGACTGAAATGTTTTGTCCATCAATGAAGGAAGTGAAGGACAACTCTCCTGTATCTGTGCATGATGCTTGGCTAAGTGGAACTAGCTCACCTTCAACAAATTTCTAG 2082 0.4544 MFHHNTNFAVLLTIFVFCSTIAATNSNCTRSCGQHFLQYPFGFSSGCKVKLNCSNDNIKVKIGEFEVQNITSDSIFVSLPVKCNRSMGVIDPLFGDNFAPTFNNSFLLQGCNSKPGGCDISSSSFIGDHNQVEGCVRKNRSEDFICFKQLQRNSSRDDVITQRHLKGIGCSFLFSAIAYDKSKEKELSLQLQMLELGWWIKGQCHCSNNASCMEVNLGREERGYRCQCHEGFVGDGFKDGDGCRSIPQCKASTLRSGGCRKAIKIGVLIGGFIIAAILVGALSLLCYFTRRRSSWLRRQMTVKRLLREAAGDSTVPLYPYKEIERATSFFDEKHRLGTGAFGTVYAGHLHNDECVAIKKIKYRDTNSVDQVINEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEYMPNGTLSQHLQRERGGVLPWTVRLTIATETANAIAYLHSAINPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMSETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIVTAMKVVDFSRPQSEINLAALAAERIRRGCLDDIIDPFLEPHRDAWTLYSVHKVSELAFRCLAFHSDMRPTMIEVAEELELIRRREWETMEETICTASSVGSVCSSPRIGRENSLGGVSFEGVAGQGSETLSVSPKTEMFCPSMKEVKDNSPVSVHDAWLSGTSSPSTNF* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01602 693 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 686 IPR044652 GO:0004672
Lapu3g01602 693 Gene3D Laminin 203 238 - -
Lapu3g01602 693 Gene3D Transferase(Phosphotransferase) domain 1 406 625 - -
Lapu3g01602 693 ProSiteProfiles Protein kinase domain profile. 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01602 693 Gene3D Phosphorylase Kinase; domain 1 291 405 - -
Lapu3g01602 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Lapu3g01602 693 Pfam Protein kinase domain 331 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01602 693 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Lapu3g01602 693 SUPERFAMILY Protein kinase-like (PK-like) 312 605 IPR011009 -
Lapu3g01602 693 FunFam Wall-associated receptor kinase-like 14 297 405 - -
Lapu3g01602 693 FunFam Wall-associated receptor kinase-like 20 406 615 - -
Lapu3g01602 693 SMART serkin_6 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01602 Lapu-Chr3 20015165 20019571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01602 1 692 Receptor kinase-like Gene Family AT2G23450 52.489 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lapu3g01602 Pkinase 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01602 - - gmx:100810861 1108.59