Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01583 ATGGCTATGGTTCTTGATGCTGTTGTTGGAAGAGTGCTTGATGAACTGCTGAGCGCTGTTGTGGAAATGAAAGACAGGGCAGTGAAGTTCAGATCCACCCTGGAAAAATTGCAGGCCACCATCGAAACAGTAGAACCACTGGCTAAGCAGATAGATGGTCTTAGCAAGAGATTGGATAAACCAGCTAAGCAAACAAAGAAGCTGATCGATCAGATGGAGAAGGGGAAGGAGCTTGTTAAGGAGTGCTCCGAAGTTGATTGGTGGAATTTCTGTTATAAGGCCAACTCCCAAGAGAAACTTCAAGACTTGATCGATTCTATTTCTCAGTACTTTCAATTGGATATGCAAGGAAATATAAACGTCCATGTGTTGGAGAACCAGGAGCTGCTGACCCAGATTCATGCGACGCTTGTGGAGAATGTTCCGAGAAGGATTGAATTAAATGGCTTGTGCTCGCCACCTGAGGCCCCTGATTTCACTGTTGGGTTGGATGTTCATTTGAGGGAGTTGAAGTTCAAGTTGCTGAAGAATCATCATTTGGTGTCAGTGCTCACAGTGACAGGAACAGGAGGCTCGGGAAAGTCAACGTTGGCCAAAAAGTTTTGTTCTGACGAGGAAGTTAAAGGTGAATTCAAGGACAACATATTCTTCATCTCCTTTGCGGAAGCGCCCAAGTTGAGCACCATAGTGCAGAGACTGTTTGAACACAATCGTTACAAGATACCAGAGTTTCAGAGTGGTGAGGATCCAGTTCATCAATTGGAAAATTTGCTAAAACAGATTGGGAAAAGCCCCATGCTGTTGGTCCTGGACGGTGTTTTGCCAGAGTCTGCATCTCTAGTTGAGAAATTCGTGTTTCAGATCCCAAACTACAAGATTTTAGTGACATCAAGGTTCACAATTAAAGGATTTGGGAAGCCATACGTGTTGAAATCACTTAATGAAGCCGATGCCTTAAACTTATTTCGCCACTCTGCATCGCTGGATCCGACTAGCTCTAACATTCCCGATAATGTTGTCAAGAAGATAGCAAAAGGGTGCAGTGGTTCTCCCTTGGCTCTTATAGTGACTGGCAAATCTCTAAGTCTTGAAGCACCAGTGGTTTGGCACAACAGGGCGAAGACATTGTCGAAGGGCCATTCTATTCTTTCTTTTAGTTCTAGTAACGATGTGCTTTTTACTTGCCTCCAAAAAAGCTTTGATGACTTGGATACTAAGGTGGCTGAGAGCTTTATGGACCTGAGCTTATTTCCTGAAGCACAGAAGATACCCGCTGCTGCACTTGTTGATATATGGGCAGAAAAGCGTGATGAAGATGATGACATTGCAATGGAGAATATCTATGAACTTGTCAAAAGGAACGTGGCTGATATTGTCGTCACAAGGAATACTGCAAGTGGCACAGTTGACTACAATTACCACTATGTTACGCAGCATGGTCTTCTTCGGGACCTAGCCATACTTCAAACAAGAAAGTTGCCGACGGAGAAGAGCCATAGACTAATAATTGACTTAAGAGGGAACAATATTCCCAAATGGTGGACTTCACAGAATGAGCATCACATTGCAGCACACACATTATCCATATCAACTGATGAAGAATTCACTTCGGAGTGGTGCAACTTGCAACCAAATGAGGTTGAGGTTCTAGTGATGAACCTTAGAGAAAAGAAGCACTCACTACCAATGTTCATGAAGAAAATGAAGAAATTAAAAGTCCTGATTATAACGAATTATGACATCTATCGTGCTGAGTTGGAGAATTTAGAGCTGCTTGATTATCTTTCTGATCTCAAACGAATCAGCACCATCCAAGTAGGTGATGTGCTGCCAAATTTGAAGGAGATGAACATTGATTACTGTGATATGGAGGAATTGCCAGCTGGAGTCTCTGATATTGTTTCCCTAAAGAAGCTAAGCATCACAAACTGCCATAAGCTTTCTAAACTTCCAATAGGAATTGGAGAGTTGGTGAATTTGGAATCACTGAGTCTTACTTCTTGTACTAAATTAGAAGAGTTGCCAGAGTCAATCACAAGCCTTCATAAACTGAACTTTCTTGACATCTCTGACTGTGTAAGTCTTGGTAAGTTACCAGAGAACATGGGGGAGTTACGTAGTTTAGAAAGGCTCAATTGCAGAGGTTGCACGAGATTGTCTGAATTGCCATACTCAGTCACGGACCTTGAGAGCTTAAGTGTCGTAGTATGTGATGAAGAGAGGGCTGCATTATGGGAACCTATCAGACCCATGTTTAGTGATCTAACGCTAGATGTAGCCCAAGTTTATTTCAACCCAGATTCTCTTTTTTAA 2313 0.425 MAMVLDAVVGRVLDELLSAVVEMKDRAVKFRSTLEKLQATIETVEPLAKQIDGLSKRLDKPAKQTKKLIDQMEKGKELVKECSEVDWWNFCYKANSQEKLQDLIDSISQYFQLDMQGNINVHVLENQELLTQIHATLVENVPRRIELNGLCSPPEAPDFTVGLDVHLRELKFKLLKNHHLVSVLTVTGTGGSGKSTLAKKFCSDEEVKGEFKDNIFFISFAEAPKLSTIVQRLFEHNRYKIPEFQSGEDPVHQLENLLKQIGKSPMLLVLDGVLPESASLVEKFVFQIPNYKILVTSRFTIKGFGKPYVLKSLNEADALNLFRHSASLDPTSSNIPDNVVKKIAKGCSGSPLALIVTGKSLSLEAPVVWHNRAKTLSKGHSILSFSSSNDVLFTCLQKSFDDLDTKVAESFMDLSLFPEAQKIPAAALVDIWAEKRDEDDDIAMENIYELVKRNVADIVVTRNTASGTVDYNYHYVTQHGLLRDLAILQTRKLPTEKSHRLIIDLRGNNIPKWWTSQNEHHIAAHTLSISTDEEFTSEWCNLQPNEVEVLVMNLREKKHSLPMFMKKMKKLKVLIITNYDIYRAELENLELLDYLSDLKRISTIQVGDVLPNLKEMNIDYCDMEELPAGVSDIVSLKKLSITNCHKLSKLPIGIGELVNLESLSLTSCTKLEELPESITSLHKLNFLDISDCVSLGKLPENMGELRSLERLNCRGCTRLSELPYSVTDLESLSVVVCDEERAALWEPIRPMFSDLTLDVAQVYFNPDSLF* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01583 770 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 765 IPR039203 GO:0050832
Lapu3g01583 770 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Lapu3g01583 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 413 IPR027417 -
Lapu3g01583 770 Gene3D - 400 487 IPR036388 -
Lapu3g01583 770 Pfam NB-ARC domain 166 401 IPR002182 GO:0043531
Lapu3g01583 770 Gene3D Ribonuclease Inhibitor 494 749 IPR032675 -
Lapu3g01583 770 Coils Coil 20 40 - -
Lapu3g01583 770 PRINTS Disease resistance protein signature 260 274 - -
Lapu3g01583 770 PRINTS Disease resistance protein signature 183 198 - -
Lapu3g01583 770 PRINTS Disease resistance protein signature 347 361 - -
Lapu3g01583 770 PRINTS Disease resistance protein signature 679 695 - -
Lapu3g01583 770 Gene3D - 150 303 IPR027417 -
Lapu3g01583 770 Gene3D - 312 399 IPR042197 -
Lapu3g01583 770 SUPERFAMILY RNI-like 558 734 - -
Lapu3g01583 770 Gene3D - 8 116 IPR036537 GO:0007166
Lapu3g01583 770 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 120 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01583 Lapu-Chr3 19409613 19414316 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01583 161 726 WRKY Transcription Factor Family AT5G45050 23.025 3.93e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01583 - - gmx:100812310 1097.42