Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01571 ATGCGGTGGTTACCCACGATTTCCTTCTCGCCTGCCACTTCCTCCTCCTCTTCCCCCGCCGCCGACCACCGCCGGAAGGCTTGGATATTCGGAAATTCGTCCAAGAAGCGCGCCTGCCCCGTCGGCGGCGAGAACGATGCCAGGTGGCACGATGATGATTCACCCTTCCCTTCCCCCGGCACGCCTCAGCCCTTGCCCCTGCCGGAGCTAGCCGCCTCCCCTGCCGTGCTCCGTAACAGAGACAGCGAGTGCCGTCTTCCCTCTCCCAAGGATGCTGCTACACCCACCTCCACCACCGGCTTTCGGATGCGGAGTGTTTTTGCTAGCCGAGACACGAGAAGGAATATGGAACAGGCTGAAACTAGGTCATCGAGAATGGTGCATCAAGATGCGAGTGGTTGTTATGAGAGTAGTCGAGATAATAGTTATACTAATAATAGTAACTTCGAGAGCGTCCCTCGTCGGAGGAGCATTTCAAGTAGTCCCTTCGCAAGTCCTTCAATGAGTCCGCAGAAAACAAGTAATGGTGAATTTGTGCCACATTATAATGCGAGTCCCAAAGGAAATCAGTTCTGGTCTGCACCAGAAATGTCTATCTGTGAACCAGGGTTGCTACCTCCTGCCTTCTTTGATTTATCCGTGTTAGGCACAGAAGCTTCTCCCTCTCCCACCTCCCATCAAAGTCCACAGAGGAAAAGTCCCCAGCAACACGTCAGAACCTTGAGTGGACCTCCATCCCCTATAAATTCCAAGTTATCACTTGAAATCTCAATGGTGCGCCGTGAAAGTAGTGCTTCTCCTGTCTGCGTTCACCCCTTGCCCCTGCCTCCTGGGGTCGCGCTGCCCTCTCCACCAGCGGCTGTTACATTTTCCCATGCTAGGTCAGAACCATTGCCAATGAAAAACCAATGGCAGAAAGGGAAACTTATTGGGCGTGGGACATTTGGAAGTGTTTATGTTGCAACCAATAGGGAAACCGGAGCATTGTGTGCGATGAAGGAAGTAGAAATATTTCCTGGTGATCCAAAATCTGCTGAGTGTATAAAACAGTTGGAGCAGGAAATTAAAGTTCTTAGCCAACTAAAACATTCAAACATCGTGCAGTATTATGGCAGTGAAATAGCTGAGGACCGGTTTTATATTTATTTGGAATATGTTCATCCTGGTTCAATTAATAAATACGTCCGAGAACATTGTGGTGCCATAACAGAATCTGTCATTCGGAATTTCACGCGACATATTCTATCAGGGTTGGCGTATTTACATAACAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTAACTCTGCTGGAATTGTTAAGCTTGCTGATTTTGGGATGGCTAAGCATCTAACTGGGTTCGAAGCTAATCTTTCTTTGAGGGGAAGTCCAAACTGGATGGCTCCAGAGCTTTTGCAGGCTGTGATGCAAAAGGATAACAACCCTGATCTTGCTTTTGCTATTGATATTTGGAGTCTGGGTTGTACCATCATTGAAATGTTCACAGGGAAGCCTCCTTGGAGTGAATATGAAGGAGCTGCAGCTCTGTTTAAGGTTATGAAGGAAACCCCTCCTATACCTGAAACATTGTCACCCGATGGTAAAGATTTCTTGAGGTGCTGCTTTAAAAGAAATCCAGCAGACCGGCCAGCAGCTACAGTTTTACTAGAACATCGATTTTTGAAAAACTCCCAACAGCCTGATGTTTTATCTCCCACTCAGCTGTATAATGGAACAAGCTTCATGGACAAACCACATAGTCCCATTAAACAATCTGAATATAAACAAGATCAGTTGTCAATCTCCTGTGCAAAGATTGCCAAGGGTAAAGCAGCTTACAGGCGAGGATTTCCCATTCCTTCGTTGGATATTCTTCCTGCATACTTGAACCAATAA 1908 0.4701 MRWLPTISFSPATSSSSSPAADHRRKAWIFGNSSKKRACPVGGENDARWHDDDSPFPSPGTPQPLPLPELAASPAVLRNRDSECRLPSPKDAATPTSTTGFRMRSVFASRDTRRNMEQAETRSSRMVHQDASGCYESSRDNSYTNNSNFESVPRRRSISSSPFASPSMSPQKTSNGEFVPHYNASPKGNQFWSAPEMSICEPGLLPPAFFDLSVLGTEASPSPTSHQSPQRKSPQQHVRTLSGPPSPINSKLSLEISMVRRESSASPVCVHPLPLPPGVALPSPPAAVTFSHARSEPLPMKNQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPGDPKSAECIKQLEQEIKVLSQLKHSNIVQYYGSEIAEDRFYIYLEYVHPGSINKYVREHCGAITESVIRNFTRHILSGLAYLHNKKTIHRDIKGANLLVNSAGIVKLADFGMAKHLTGFEANLSLRGSPNWMAPELLQAVMQKDNNPDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSPDGKDFLRCCFKRNPADRPAATVLLEHRFLKNSQQPDVLSPTQLYNGTSFMDKPHSPIKQSEYKQDQLSISCAKIAKGKAAYRRGFPIPSLDILPAYLNQ* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01571 635 ProSiteProfiles Protein kinase domain profile. 304 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01571 635 MobiDBLite consensus disorder prediction 217 250 - -
Lapu3g01571 635 ProSitePatterns Protein kinases ATP-binding region signature. 310 333 IPR017441 GO:0005524
Lapu3g01571 635 MobiDBLite consensus disorder prediction 110 124 - -
Lapu3g01571 635 SMART serkin_6 304 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01571 635 FunFam Mitogen-activated protein kinase kinase kinase 5 301 602 - -
Lapu3g01571 635 MobiDBLite consensus disorder prediction 1 68 - -
Lapu3g01571 635 MobiDBLite consensus disorder prediction 216 250 - -
Lapu3g01571 635 Pfam Protein kinase domain 305 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01571 635 SUPERFAMILY Protein kinase-like (PK-like) 295 595 IPR011009 -
Lapu3g01571 635 MobiDBLite consensus disorder prediction 125 181 - -
Lapu3g01571 635 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 57 578 - -
Lapu3g01571 635 Gene3D Transferase(Phosphotransferase) domain 1 300 604 - -
Lapu3g01571 635 MobiDBLite consensus disorder prediction 110 181 - -
Lapu3g01571 635 MobiDBLite consensus disorder prediction 7 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01571 Lapu-Chr3 19146180 19151450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01571 78 603 MAP Kinase Kinase Kinase AT5G66850 56.859 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu3g01571 Pkinase 1.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01571 - - gmx:100790701 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00587 2 5109295 5112954 Lapu3g01571 3 19146180 19151450 PCT