Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01570 ATGGCCCATGAACAAAGGATTGCAGCTTCTCTTTTGCGCCTTCACTTCCATGATTGTTTCGTCAATGGATGTGATGGATCTGTGCTACTTGATGATACCAGCAGTTTCAAAGGGGAGAAAAATGCATTGCCTAATCGAAATTCGCTCAGAGGATTTGAGCTCATTGACACAATTAAGCATGCAATAGAATTTGTATGTCCATCCACAGTGTCATGTGCTGATATACTAGCTCTAGCAGCAAGAGAAGCGGTTAATCTTAGTATAGGACAATACTGGAGGCCTGCACTTGTTGGTCGTAGAGATGGCACAACAGCAAGCGTGAGCGAGGCTAATAAGTTGCCTTCTCCCTTTGACACGCAACAAACCATTACCAACAAGTTCATTGCCAAGGGTCTTGAAATTAAGGATTTAGTTGTGCTCTCAGGAGCCCACAGCATAGGCTTTGCCCAGTGCTTTACGTTCAGCAGAAGACTTTTCAACTATAAGGGCACTGGAAAACCAGATCCATCACTGGATGCTTCACTTTTACAAAATTTACGGAAACTGTGTCCAAATGGGAGTTTTGACACCAACTTGGCTCCGTTGGATCCAATCACCCCAAACTCATTTGACAACATGTATTTCAGAAACCTTGTGAAGAATTTAGGACTACTGCAGACAGATGAGGCTCTTATGAGTGATAACACAACTGCTTCGTTGGTGGTCAGGTACAGTGAGTTGCCAACTGGTCTGCTAAACTTTTATCAAGACTTTGATGTTTCTCTTCAGAAAATGGGGTATATAGGTATACTTACAGGACAACAAGGGGAGATAAGGAAAAACTGCAGGATGGTGAACTAG 840 0.4298 MAHEQRIAASLLRLHFHDCFVNGCDGSVLLDDTSSFKGEKNALPNRNSLRGFELIDTIKHAIEFVCPSTVSCADILALAAREAVNLSIGQYWRPALVGRRDGTTASVSEANKLPSPFDTQQTITNKFIAKGLEIKDLVVLSGAHSIGFAQCFTFSRRLFNYKGTGKPDPSLDASLLQNLRKLCPNGSFDTNLAPLDPITPNSFDNMYFRNLVKNLGLLQTDEALMSDNTTASLVVRYSELPTGLLNFYQDFDVSLQKMGYIGILTGQQGEIRKNCRMVN* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01570 279 ProSiteProfiles Plant heme peroxidase family profile. 1 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Plant peroxidase signature 194 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Plant peroxidase signature 50 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Plant peroxidase signature 253 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Plant peroxidase signature 135 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Plant peroxidase signature 10 30 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Plant peroxidase signature 89 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Plant peroxidase signature 69 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Plant peroxidase signature 210 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PANTHER PEROXIDASE 72-RELATED 2 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 ProSitePatterns Peroxidases active site signature. 8 19 IPR019794 GO:0004601
Lapu3g01570 279 PRINTS Haem peroxidase superfamily signature 70 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Haem peroxidase superfamily signature 8 22 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Haem peroxidase superfamily signature 136 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 PRINTS Haem peroxidase superfamily signature 89 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 Pfam Peroxidase 3 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 FunFam Peroxidase 114 258 - -
Lapu3g01570 279 Gene3D - 2 279 - -
Lapu3g01570 279 Gene3D Peroxidase, domain 2 114 258 - -
Lapu3g01570 279 SUPERFAMILY Heme-dependent peroxidases 3 279 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu3g01570 279 CDD secretory_peroxidase 1 278 IPR033905 GO:0004601|GO:0042744
Lapu3g01570 279 ProSitePatterns Peroxidases proximal heme-ligand signature. 136 146 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01570 Lapu-Chr3 19129177 19131335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01570 4 275 Peroxidase AT1G49570 60.145 4.08e-110 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01570 K00430 - gmx:100789642 450.284