Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01533 ATGGCTAATGAAGAGGAACAGAAAAACAATCACATGGACACCGAAGAACTCTATAATAAGAATCTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGAAACCAGTGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGCTCCGCGAGATGACACTAGAACACCCTCTGAACGTCATGGCTACACCAGCAGACGAAGGGCAACTTCTGAGCATGCTTATTAAGCTTATTAATGCCAAGAACATCTTGGAAATTGGTGTATACACTGGTTACTCTCTTCTCTCCGCTGCCCTGGCCCTTCCTCCAGATGGAAAGATCTTGGCTTTGGACGTGAACCGTGAATACTATGAATTAGGTTTGCCCATCATTGAAAAAGCTGGTGTGGGTCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCTTTTCTTGACGAGCAGCTTAAAGATGAAAATAACAAGGGAACGTTCGATTTCGTTTTCGTGGATGCTGATAAGAACAGTTACTTGAACTATCACAAGAGGATAATTGAACTGGTGAAGGTTGGAGGGCTGATCGGATACGATAACACCCTATGGGGTGGATCTGTGGCCGCGGCGCCCGATGCACCGTTTATGGAATCCTATTGGCCTCTTCGCGGCTATGTGATGGAGCTAAACAATTACCTGGCACAAGATTCAAGGATTGAGATTTGCCAGCTCTCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 741 0.4656 MANEEEQKNNHMDTEELYNKNLLQSDALYQYILETSVYPREHECLKELREMTLEHPLNVMATPADEGQLLSMLIKLINAKNILEIGVYTGYSLLSAALALPPDGKILALDVNREYYELGLPIIEKAGVGHKIDFREGPALPFLDEQLKDENNKGTFDFVFVDADKNSYLNYHKRIIELVKVGGLIGYDNTLWGGSVAAAPDAPFMESYWPLRGYVMELNNYLAQDSRIEICQLSVGDGITLCRRII* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01533 246 PANTHER O-METHYLTRANSFERASE-RELATED 19 245 - -
Lapu3g01533 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Lapu3g01533 246 Gene3D Vaccinia Virus protein VP39 11 246 IPR029063 -
Lapu3g01533 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Lapu3g01533 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
Lapu3g01533 246 FunFam Caffeoyl-CoA O-methyltransferase 1 14 246 - -
Lapu3g01533 246 CDD AdoMet_MTases 81 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01533 Lapu-Chr3 18211015 18212577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01533 4 245 Monolignol Biosynthesis Gene Families AT4G34050 69.835 1.54e-125 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01533 K00588 - gmx:100305498 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01533 3 18211015 18212577 Lapu3g01533 3 18211015 18212577 ECH