Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01532 ATGGCTAATGAAGAGGAACAGAAAAACAATCGCTTGAGCACCAGAGAACTCTCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGAAACCAGTGTTTATCCAAGAGAGCACGACTGCTTGAAGGAGCTCCGCGAGATGACACTAAAACACCCTAAGAACATCATGACTACACCACCAGAAGAAGGGCAACTTCTTAGCATGCTTATTAAGCTTATTAATGCCAAGAACACCTTGGAAATTGGTGTATACACTGGTTACTCTCTTCTCTCCACTGCCCTGGCTCTTCCTCCAGATGGAAAGATCTTGGCTTTGGACGTGAACCGTGAATACTATGAATTAGGTTTGCCCATCATTGAAAAAGCTGGTGTGGGTCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCTTTTCTTGACGAGCAGCTTAAAGATGAAAATAACAAGGGAACGTTCGATTTCGTTTTCGTGGATGCTGATAAGAACAATTACTTGAACTATCACAAGAGGGTAATTGAACTGGTGAAGGTTGGAGGGCTGATCGGATACGATAACACCCTATGGGCTGGATCTGTGGCCGCGGCGCCTGATGCACCGTTGATGGAATACTTTTGGCCTCTTCGCGGCTATGTGATGGACCTGAACAATTACCTGGCACAAGATTCAAGGATTGAGATTTGCCAGCTCTCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 741 0.4615 MANEEEQKNNRLSTRELSHKTLLQSDALYQYILETSVYPREHDCLKELREMTLKHPKNIMTTPPEEGQLLSMLIKLINAKNTLEIGVYTGYSLLSTALALPPDGKILALDVNREYYELGLPIIEKAGVGHKIDFREGPALPFLDEQLKDENNKGTFDFVFVDADKNNYLNYHKRVIELVKVGGLIGYDNTLWAGSVAAAPDAPLMEYFWPLRGYVMDLNNYLAQDSRIEICQLSVGDGITLCRRII* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01532 246 PANTHER O-METHYLTRANSFERASE-RELATED 18 245 - -
Lapu3g01532 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
Lapu3g01532 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Lapu3g01532 246 Gene3D Vaccinia Virus protein VP39 11 246 IPR029063 -
Lapu3g01532 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Lapu3g01532 246 FunFam Caffeoyl-CoA O-methyltransferase 1 14 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01532 Lapu-Chr3 18186495 18188128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01532 4 245 Monolignol Biosynthesis Gene Families AT4G34050 71.901 6.10e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01532 K00588 - gmx:100305498 430.254