Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01529 ATGAAGAAACATCAAAACAATCTGAAAAGCATGGATGACATTCAAGTCATCAGCACCACTACAATCAAGGCACCCAATCATACCAGCCATAACTCACCTCATCAAATCCATTTATCTCTATTCGATCTCCCATTTCTCACAGTTGGATCCATCCAGAAAGGCCTTGTTTATCGCAACCAAAACCACACACCATATCAAATACATAATCTCCAACACTCCCTTTCATCCACTCTTGCCTTCTTTCCTCCCCTTACTGGTCGTCTTGCCATACTCCAACATCACCACAACATTGTCTCATCCCACATCCTATGCAACAACGCTGGAGTCCTCTTTGTCCACGCCGTTGCACCCAACACCACTGTCGCTCACGTCCTTCAACCCAAATACATTCCTCCCATTGTTCGCTCCTTCTTCCCACTCAATGGCGTTAAAAATTACCAGGGAACCTCACAGCCATTGCTGGCAGTGCAAGTGACGGAGCTAGTTGACGGCATCTTCATCGCTCTAACAATCAACCACGTTGTTGCTGACGGCAACTCTTTCTGGCATTTCGTGAATTCGTGGGCTGAAATCTCACGTGGCTCCCTTCAAATATCCAAACTCCCTTCTCTCCAACGTTACTTTCCCGATGGCATTGGCCACCCAATATGCTTTCCTTTCACAAAGGAGGAAGACACCCAACGCTCCCCAAACCTCAAACCACAAACTCCACCTGAAAGGGTCTTCCATTTCACGAAGGAAAAAATCGCGGAACTGAAAAAAAAAGCCAACGCAGAGGCCAACACCGACAAAATATCTTCTCTGCAAGCGCTTTTAACTCTACTTTGGAGCTCTGTGATTCGTTGCCAACACCTAGAGCCACAAGAAGAGGTGAGTTGCGTAGTTCCGATTGGCGTCGGGGCCAGGATGGTTCCACCACTGGCAGAGGGTTATTTAGGAAACAAGGTGATGCTGGGTGTAGTCACCATGAAAGCTGGGGAGCTATTGGAGGGTGGGGTTGGAAAGGGTGCTTTGGAGATGAACAAGATGATTGCTTTGCACTCTCACGAGAGGGTAAAGAACCACTGTGAGTCTTGGGTGAGAACTCCGAGGCTGCTGAGTTTGTTTAGAGGTTCATTGGTCATTAGCAGTTCTCCGAGGTTCAACATTTACGGTAGCGATTTCGGGTGGGGAAAGCCCGTGGCAGTAAGAAGTGGCAGCGCAAATAAGAGTTACGGAAAGATTAGTGTGTTTGCAGGCGCTGAAGAAGGTTCTATTGACATTGAAGTGTGCCTTCCTTATGAGATTTTGGAGGCAATGGGAAATGATCCTGACCTCATGGATGCAGTTTTCAACTAG 1338 0.4738 MKKHQNNLKSMDDIQVISTTTIKAPNHTSHNSPHQIHLSLFDLPFLTVGSIQKGLVYRNQNHTPYQIHNLQHSLSSTLAFFPPLTGRLAILQHHHNIVSSHILCNNAGVLFVHAVAPNTTVAHVLQPKYIPPIVRSFFPLNGVKNYQGTSQPLLAVQVTELVDGIFIALTINHVVADGNSFWHFVNSWAEISRGSLQISKLPSLQRYFPDGIGHPICFPFTKEEDTQRSPNLKPQTPPERVFHFTKEKIAELKKKANAEANTDKISSLQALLTLLWSSVIRCQHLEPQEEVSCVVPIGVGARMVPPLAEGYLGNKVMLGVVTMKAGELLEGGVGKGALEMNKMIALHSHERVKNHCESWVRTPRLLSLFRGSLVISSSPRFNIYGSDFGWGKPVAVRSGSANKSYGKISVFAGAEEGSIDIEVCLPYEILEAMGNDPDLMDAVFN* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01529 445 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 440 - -
Lapu3g01529 445 Gene3D - 228 435 IPR023213 -
Lapu3g01529 445 Gene3D - 12 212 IPR023213 -
Lapu3g01529 445 Pfam Transferase family 14 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01529 Lapu-Chr3 18125272 18128556 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01529 70 428 Monolignol Biosynthesis Gene Families AT5G48930 26.720 1.50e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01529 - - gmx:100797643 608.601