Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01528 ATGGAAGCCGTCCGAGTCATCTCCACCACCACAATCAAAGCAACCACTCACAATAACGCTAACTCACCTCTTAAGGTCGATTTAACTCCCTGGGATCTCCAATTTCTCCCTACTGAAACCATCCAAAAAGGCCTTCTTTTTCGCAAAGTAAAACACACACAATTCCAAATCCAGCACGTCCAGCGCTCCCTTTCCTCCACTCTTGCCTTCTTTCCACCCCTCGCAGGTCGTCTCGCCATACTCCAACATCACCACAACATTGTCTCATCCCACATCCTATGCAACAACGCTGGAGCACTCTTTGTCCACGCTGTTGCACCCAACACCACTGTTTCTCACATCCTTCACCCCAAATACGTTCCTCTCATTGTTTCCTCCTTCTTCCAAATTAACGGAGTTAAGAACTACGAGGGCACGTCACAGCCATTGCTAGCTGTGCAAGTGACAGAGCTAGTTGACGGCATCTTCATCGCCCTAACAATCAACCACGTCGTTGCTGACGGCAACTCGTTGTGGCATTTCGTGAATTCTTGGGCTGAAATCTCACGTGGCTCCCTTCAAATATCTAAACTTCCTTTTCTACAGCGTTACTTCCCCGATGGCATTGACCACCCCATACGCTTTCCCTTCACAAAGGAAGAAGAAAATCAGCACTCCCCAAACCTCAAACCACAAACTCCAATTGAGAGGGTCTTCCATTTCTCGAAGGAAAAAATCGCGGAACTGAAATCAAAAGCTAATGCAGAGGCCAACACCGACAAAATATCTTCTCTGCAAGCGCTTCTAACTCTCCTTTGGCGCGCCGTGACACGTTGCAAACGCGTCGACCCGCAAGAAAACGTGCATTATGTGTTGTTCATTGGCGTTTGGTCAAGGATGGTTCCACCACTGGCAGAGGGTTATTTTGGAAACTCAGTGATAGCCACTATTGTCACCATGAAAGCGGGGGAGCTATTGGAGGGTGGGCTTGGAAAGGGTGCTTTGGAGATGTACAAGGTGATTTCTCTGCACTCTGGTGAGAAGGTAAAGAACCACTATGAATCTTGGGTGAGAAGGCCAAGGCTGTTAACGTTGCCAAGTGGAGTGGCTGGTAGTAATTACTTGATCACTAGCAGTTCACCGAGATTCAACGTATTAGGTAACGATTTTGGTTGGGGAAAGCCTGAAGCAGTTCGAATTGGAGGTGGACGACATAAACGTAACGGTATGATAACTGTATTTGGTGGCGATGAAGAAGGGTCCATTGACATTGTAGTGGACCTTCCTTATTGGATTTTGGAGGCCATGGGAAATGATGCAGAGTTCATGGATGTTGTGTCGAACTAA 1326 0.4744 MEAVRVISTTTIKATTHNNANSPLKVDLTPWDLQFLPTETIQKGLLFRKVKHTQFQIQHVQRSLSSTLAFFPPLAGRLAILQHHHNIVSSHILCNNAGALFVHAVAPNTTVSHILHPKYVPLIVSSFFQINGVKNYEGTSQPLLAVQVTELVDGIFIALTINHVVADGNSLWHFVNSWAEISRGSLQISKLPFLQRYFPDGIDHPIRFPFTKEEENQHSPNLKPQTPIERVFHFSKEKIAELKSKANAEANTDKISSLQALLTLLWRAVTRCKRVDPQENVHYVLFIGVWSRMVPPLAEGYFGNSVIATIVTMKAGELLEGGLGKGALEMYKVISLHSGEKVKNHYESWVRRPRLLTLPSGVAGSNYLITSSSPRFNVLGNDFGWGKPEAVRIGGGRHKRNGMITVFGGDEEGSIDIVVDLPYWILEAMGNDAEFMDVVSN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01528 441 Gene3D - 2 206 IPR023213 -
Lapu3g01528 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 436 - -
Lapu3g01528 441 Gene3D - 209 429 IPR023213 -
Lapu3g01528 441 Pfam Transferase family 4 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01528 Lapu-Chr3 18109250 18110575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01528 55 421 Monolignol Biosynthesis Gene Families AT5G48930 28.385 2.01e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01528 - - gmx:100797643 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01528 3 18109250 18110575 Lapu3g01528 3 18109250 18110575 ECH