Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01521 ATGGAAGCATCGGAGAATTGCTCTGTCAAAGTCGCTCTTCACATTCGTCCTCTCATTGCCGATGAACGACAGCAAGGTTGCATTGAATGTGTTTCCGTCACGCCAGGGAAGCCTCAGGTTCAAATTGGATCACATTCCTTTACATTTGATTATGTTTATGGAAATGATGGATCTTCTTCGGCTGACATGTTTGAGGAATGCGTTGCTCCGTTGGTTGATGGCTTATTCCAAGGATACAATGCTACAGTACTTGCCTATGGTCAGACAGGATCTGGGAAAACGTATACCATGGGAACTGGCTATAATGACAATTGTCGGCCTGGATTAATTCCCCAGGTTATGAGTGCCTTATTCAACAAAGTTGAAACACTAAAGCATCAAACAGAATTTCAGTTGCGAGTCTCCTTCATTGAGATTTTAAAGGAAGAGGTCAGGGACCTGTTGGATGCAGTATCTTTGGGCAAAACAGACACCTCTAACTCTAATGGCCATTCTGGAAAAATAAATTTTCCTGGGAAGTCTTCAATACAAATCCGTGAAACAGCAAATGGAATAATAACACTGGCAGGAATAACTGAACTTGCTGTAAGTACATTACATGAGATGTCTGCATACTTGGAGCAGGGTTCTTCAAGTAGGGCAACAGGAAGTACAAATATGAACAACCAATCCAGTCGGTCTCATGCCATTTTCACAATTACATTAGAACAAATGCACAAGCTCCATTCTGTTTCTACCACCAATGACTCTTCAGATGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGATGGTCTTCGATTGAAAGAAGGCATACACATCAATAAAGGTCTTCTTGCTCTTGGTAATGTCATAAGTGCGCTGGGGGATGAGAAAAAGCGAAAGGAAGGTGTGCATGTTCCTTATCGTGATAGCAAGCTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATAAGTCCTGCTGATGTCAATGCCGAGGAAACTCTCAATACTCTCAAGTATGCAAACCGTGCTCGCAATATTCAAAATAAGCCTGTTGTTAATCGAGATTTAATATCCAATGAGATGCAGCAAATGCGCCAGCAGTTGAAGTACTTGCAGGCTGAACTCTGTTCTCGGGGAGCGGCTCCCGGTGATGAAGTGCGGGCTCTTAAGGAAAGGGTTGCTTGGCTTGAGGCAACTAATGAGGACCTTTGCAGAGAACTTCATGAATATCGCAGTAGACGTGCTTTTGTAGAGAGATGTGAAATCGATGAACCAGAAGATGGAAACATTTATCTCATGAAAGCTAGTGGGCTTGAGAGGCGCTTTCAGAGCTTAGATTCATCTGACCATCCCATGGTTGGAAGTATATCAGGTGATGATTCAAGGGAAACTGATGAAGCAGAAAAAGAGTTGGAGCATGTGCTATTACAAAATACCATGGATAAAGAGATGAATGAGTTGAATAAGCGGTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATTGGAGTTGATACTGAGGCACTCAAACAACACTTTGGCAAGAAAGTTGTGGAACTTGAGGAGGAGAAAAGAAAAGTGCAGGAAGAGAGGGACAGATTATGGCATGAGGTAGAGAATCTTGCTACTAATGCAGATGGTCCAGCACACAAAACCCAAGATGTTCGTGGCCAAAAGTTGAAAGCATTGGAAGCACAGATTTTAGAACTCAAGAAGAAACAAGAAAGCCAGGTGCAACTATTAAAGCAAAAAGAAAAGAGCGAAGAAGCCGCAAAAAGACTGCAGGCTGAGATACAGTATATCAAGGCTCAGAAGGTGCAGTTGCAGCATAAAATGAAACAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGTGAGAAGGAGCTGCTCCAGTTGAAAAAGGAGGGAAGAAAGAATGAATACGAAAGACATAAACTTGAGGCTCTAAACCATCGCCAAAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACAAAAAGGCTAAAAGAGTTGTTGGAAGCCCGTAAATCTTCTCCTCGTGACAACTCTGTTTATTCAAATGGACATCTACATCCCGGGCTGGTCAATGAAAAATCCCTCCAAAAGTGGCTTGATCAGGAGGTGGAGGTCATGGTACATGTGCATGAAGTTCGTGCTGAATTTGACAAACAAAATCAAGTCCAAGCTGCACTGGAAGAAGAGTTGACTTTACTAAAGCAGGATCAGTTTTCAGATGGGCAGAGTATTCCCACAGGAAAGAGCAGATATTTGAGGCTGTTATCCATGTCGCCAGATGCAAAAGTTGAGAGGATAGCTTCTCTTGAGAACATGTTGTGCATGTCTTCAGTTGCTTTGAAAGCCATGGCTTCACAACTTACTGAGGCAGAAGAAAGGGAACGCACGTTAAACAACCGTGGTCGTTGGAACCAGCTACGCTCAATGGGAGATGCAAAGAATGTGCTTCAGTATCTGTTCAATGCTACTGCAGAAGCAAGGTGTCAATTGTTGGAAAAGAATATGGAACTTAAAGATTTGAAAGAGCAACTAAACGAGCTTGTAGCACTACTACAACAAAGTGAAACACAAAGAAAAGAACTTGTAAAGGAGCAAAAAATAAGGGAACAAGCTGTTGCCATCACGTTGAATACACCGGCATTGGAAAATTCACGGTCCTTGAAACACCTTGCTGATGAAATGAGTGGTCCGTTGTCTCCAATGTCACTCCCTGCACCAAAGCAACTCAAATTCACTCCTGGAGTCGTTAATTGGTCTGTCACGGAGTCGGCTACATTTTTAGACGAAGCACGAAAGATGATACCCATTGGGGAGTTGTCAACAAAGAGGCTAGCTGCTATGGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGTTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGATGAGACAATTATGAGGTCAAGGCCTCGAGCACAAGCTTTAATTAATGTGTGA 3093 0.429 MEASENCSVKVALHIRPLIADERQQGCIECVSVTPGKPQVQIGSHSFTFDYVYGNDGSSSADMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYNDNCRPGLIPQVMSALFNKVETLKHQTEFQLRVSFIEILKEEVRDLLDAVSLGKTDTSNSNGHSGKINFPGKSSIQIRETANGIITLAGITELAVSTLHEMSAYLEQGSSSRATGSTNMNNQSSRSHAIFTITLEQMHKLHSVSTTNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVVNRDLISNEMQQMRQQLKYLQAELCSRGAAPGDEVRALKERVAWLEATNEDLCRELHEYRSRRAFVERCEIDEPEDGNIYLMKASGLERRFQSLDSSDHPMVGSISGDDSRETDEAEKELEHVLLQNTMDKEMNELNKRLEQKESEMKLIGVDTEALKQHFGKKVVELEEEKRKVQEERDRLWHEVENLATNADGPAHKTQDVRGQKLKALEAQILELKKKQESQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRKNEYERHKLEALNHRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLHPGLVNEKSLQKWLDQEVEVMVHVHEVRAEFDKQNQVQAALEEELTLLKQDQFSDGQSIPTGKSRYLRLLSMSPDAKVERIASLENMLCMSSVALKAMASQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFNATAEARCQLLEKNMELKDLKEQLNELVALLQQSETQRKELVKEQKIREQAVAITLNTPALENSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNWSVTESATFLDEARKMIPIGELSTKRLAAMGQAGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINV* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01521 1030 Coils Coil 809 829 - -
Lapu3g01521 1030 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01521 1030 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01521 1030 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01521 1030 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01521 1030 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1020 IPR027640 GO:0003777|GO:0007018
Lapu3g01521 1030 Coils Coil 375 395 - -
Lapu3g01521 1030 Coils Coil 407 427 - -
Lapu3g01521 1030 Coils Coil 498 525 - -
Lapu3g01521 1030 CDD KISc_KIF4 7 368 - -
Lapu3g01521 1030 FunFam kinesin-like protein KIN-4A isoform X1 2 395 - -
Lapu3g01521 1030 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01521 1030 Gene3D Kinesin motor domain 1 395 IPR036961 -
Lapu3g01521 1030 Coils Coil 678 698 - -
Lapu3g01521 1030 Pfam Kinesin motor domain 35 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01521 1030 Coils Coil 580 631 - -
Lapu3g01521 1030 Coils Coil 530 557 - -
Lapu3g01521 1030 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g01521 1030 Coils Coil 738 758 - -
Lapu3g01521 1030 Coils Coil 852 893 - -
Lapu3g01521 1030 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu3g01521 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01521 Lapu-Chr3 17918493 17937636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01521 9 400 Calmodulin-binding Proteins AT5G65930 34.848 1.05e-56 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01521 - - gmx:100790341 1832.77