Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01509 ATGACTCTCTTCCGTCAACCCCTCATAATTTCGTTGCTTCTTCTCCTCACTGTTAACCAGTGTTGGGGCCTGAGTAGAGACGGCGTTCTGTTGCTTTCTTTCAAGTACGCTGTGTTCAACGACCCACTTTACGTCCTCGCAAACTGGAACTACAGTGACGACACACCCTGTGCCTGGAACGGCGTTTCTTGTTCCACCGTAGCAGCCACCAACGATACCGAATACCGCGTCACATCGTTGTCGCTTCCCAATTCTCAGCTTTTGGGTTCAGTTCCCTCCGATCTGGGTTCCCTTGAGCACCTTCAAGTTCTTGACCTTTCCAACAACTCCCTCAACGGCTCTCTTCCTTCTTCGCTGTCCCAAGCCTCCCAGCTTAGGTTCCTCAACCTCTCTAACAATTTGATTACAGGGGAGATTCCGGAGTCCATAGCGCAGCTTCCGAATCTCCTCTGCCTAAACCTCTCCGACAATGCTTTGGCGGGAAAACTGCCTCACGATTTCTCCAACATGCATAGCCTAACTCTGGCTTCCTTCAAGAACAACTATTTGTTCGGCTTTCTTCCCAGTGGGTTGAGAACGTTGCAGGTTTTGGATCTGTCTTCAAACCTGTTCAACGGGACTCTTCCCGCGGATTTCGGCGGAGAAGCCGTGCGTTACCTAAACATCTCCTATAACAGATTTTTCGGCGAAATCCCGACAGAGTTCGCGGCCAACATTCCGGGGAACGCCACTGTCGATCTCTCTTTCAACAACCTCACCGGCCAAGTTCCAGACTCCGCTGTGTTTTTGAATCAGAACTGGAAATCATTCTCCGGTAACGTTAACCTGTGTGGAGAACAAACGAAGAATGTGTGTCGTGTTGCTTCCTCGCCGTCCTCTAAACCGAAAGTTTCTGGTCCTATATCTCCTCCTGCAATCGCGGCAATCCCGAAGACGATTGATTCTTCGGCAGCGCCGACGGGGAAAAAGGAGGGTGGTCTGAAACGAGGAACGGTTATAGGAATCGTTGTGGGAGACGTGATTGGCATTGCGATCCTGGGCATGATATTCGTACAGGTGTACCGGTTGAAGAAAAAGAAGGAGACGGAGGGTGGCGTGAAGAAGGAGGCGATTGCGAGGAGCGAGAGTGAGAGTTCGCGGGAGTCAAGAAGGTTTATGAGATGGTCGTGTTTGAGTAAAAGAGCGGAAGAGGAAGAGTGTTCGGAGACATCAAGCAGTTGTGATAGTGAAGTGGAGGGTGCAAAAGAGTCGGGGCAGAAGCACAAGGGTGCGCAACAGGAGGACAAAGCGGGGACTCTTGTGATTGTGGACGGTGAACGACAGCTTGAACTGGAAACGTTGCTGAAGGCTTCTGTGTATATATTGGGTGCCACGGGGTCAAGCATAATGTACAAGGCTGTCCTGGAAGATGGTATGTCGTTGGCCGTTCGGAGAATCGGGGAGAGCGGTGTGGAGCGCTTCAAGGACTTCCAGAACCAGGTTCGACTTATTGCAAAACTTGTGCACCCTAATCTGGTTCGCGTTCGTGGCTTCTACTGGGGACACGATGAGAAGCTCATCATCTATGATTTCGTTCCAAACGGATGCCTTGCCAATGTTCGTTACAGGAAGGTGGGGTCCTCGCCGAGTCATTTACCATGGGAAGTCAGGCTGAAGATAGCGAAAGGGGTGGCACGTGGGCTGACTTACCTCCACGAGAAGAAACACGTGCATGGAAACTTGAAGCCTAGCAATATTCTACTGGGCAACGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGGATAGTGACCGGTGACACCAGTTATAAGGCTGGCGGATCCGCGCGTATTTTTGGGAGCAAGAGATCCACGGCCTCGCGGGACAGTTTCCAAGACATTACGTATGGGCCCAGCCCGAGTCCAAGCCCGAGCCCCAGCTCAATCATGGGCTTGTCTCCTTACCATGCTCCCGAGTCGCTCAGGAACCTGAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTCATCTTTCTTGAGCTTCTAACGGGGAAGATTGTTGTTTTGGATGATATGGGCCAAGTGCCTGGGGTTTTGATGGAGGATAAGAACCGGGCCTTGCGTATGGTTGATATGGCTATCCGGGCCGACATGGAGGGTAGAGAGGAGGCCCTGTTGGCCTACTTCAAGCTAGGGTATAGTTGTGTGTCTAGCGTTCCACTGAAAAGGCCTCCAATGAAAGAGGTGCTACAAGTTCTTGAAAAGATTTCATCCTCCTCTTCTTCCTCCTCCTCCTATTATTATAACGTCTAA 2298 0.5126 MTLFRQPLIISLLLLLTVNQCWGLSRDGVLLLSFKYAVFNDPLYVLANWNYSDDTPCAWNGVSCSTVAATNDTEYRVTSLSLPNSQLLGSVPSDLGSLEHLQVLDLSNNSLNGSLPSSLSQASQLRFLNLSNNLITGEIPESIAQLPNLLCLNLSDNALAGKLPHDFSNMHSLTLASFKNNYLFGFLPSGLRTLQVLDLSSNLFNGTLPADFGGEAVRYLNISYNRFFGEIPTEFAANIPGNATVDLSFNNLTGQVPDSAVFLNQNWKSFSGNVNLCGEQTKNVCRVASSPSSKPKVSGPISPPAIAAIPKTIDSSAAPTGKKEGGLKRGTVIGIVVGDVIGIAILGMIFVQVYRLKKKKETEGGVKKEAIARSESESSRESRRFMRWSCLSKRAEEEECSETSSSCDSEVEGAKESGQKHKGAQQEDKAGTLVIVDGERQLELETLLKASVYILGATGSSIMYKAVLEDGMSLAVRRIGESGVERFKDFQNQVRLIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEVRLKIAKGVARGLTYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITYGPSPSPSPSPSSIMGLSPYHAPESLRNLKPHPKWDVYSFGVIFLELLTGKIVVLDDMGQVPGVLMEDKNRALRMVDMAIRADMEGREEALLAYFKLGYSCVSSVPLKRPPMKEVLQVLEKISSSSSSSSSYYYNV* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01509 765 MobiDBLite consensus disorder prediction 399 425 - -
Lapu3g01509 765 CDD STKc_IRAK 455 751 - -
Lapu3g01509 765 FunFam Leucine-rich repeat receptor-like protein kinase 193 287 - -
Lapu3g01509 765 SMART LRR_typ_2 98 122 IPR003591 -
Lapu3g01509 765 SMART LRR_typ_2 191 214 IPR003591 -
Lapu3g01509 765 SMART LRR_typ_2 146 169 IPR003591 -
Lapu3g01509 765 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lapu3g01509 765 Pfam Protein kinase domain 455 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01509 765 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 180 757 IPR046959 -
Lapu3g01509 765 Pfam Leucine rich repeat 77 135 IPR001611 GO:0005515
Lapu3g01509 765 MobiDBLite consensus disorder prediction 624 646 - -
Lapu3g01509 765 Gene3D Ribonuclease Inhibitor 25 189 IPR032675 -
Lapu3g01509 765 Gene3D Ribonuclease Inhibitor 190 287 IPR032675 -
Lapu3g01509 765 Gene3D Phosphorylase Kinase; domain 1 415 524 - -
Lapu3g01509 765 Gene3D Transferase(Phosphotransferase) domain 1 526 763 - -
Lapu3g01509 765 ProSiteProfiles Protein kinase domain profile. 449 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01509 765 SUPERFAMILY Protein kinase-like (PK-like) 454 752 IPR011009 -
Lapu3g01509 765 SUPERFAMILY L domain-like 27 278 - -
Lapu3g01509 765 ProSiteProfiles Leucine-rich repeat profile. 124 146 IPR001611 GO:0005515
Lapu3g01509 765 PRINTS Leucine-rich repeat signature 101 114 - -
Lapu3g01509 765 PRINTS Leucine-rich repeat signature 146 159 - -
Lapu3g01509 765 FunFam Os07g0541700 protein 530 615 - -
Lapu3g01509 765 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 24 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01509 Lapu-Chr3 17753584 17756039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01509 4 763 Receptor kinase-like Gene Family AT4G37250 57.197 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu3g01509 Pkinase 9.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01509 - - pvu:PHAVU_003G240400g 1233.39