Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01502 ATGGAGATTCTTAAGCTCCATAGAATTCAACACTCTCTGTGTATACAACTTGTTTTCCTTCTTCAGCTCTCATCACTGCAGTTCCCCTCACTCGGTTACAACTTTCCGGACAAGTACTTTATCAATTGTGGGTCAGACAACAATGTTACCGAAAGTGGCAAGCTTTACGTTGGTGAATCAAACCTTGAAGCCAGTTTTATCAACAGTACCACAGCAAAGAATGAGTCATCGGTGCCTTCTCCTCTTTACCAAACAGCAAGGATTTTTCGAAGGGAATCTTGGTACAAGTTCAAAATCGATTCAAATGGCACCTACCTGGTACGCCTCCATTTCTTCCCTTTCTCTTCCCCAAGTAATCTTTCCTCCGCCAGGTTCAACGTTTCAGTTCCTCGTTTCTGGTTGTTGCAAAATTTTAATGGTAGAAATGCTACCGATAACAACTCTGCTGTAGTAAAAGAGTTTTTCATGGAAATCAGTTCTCCCAGCTTCAAAATAACCTTCAGACCTCTTGAATCATCATTTGCATTTGTGAATGCTATAGAACTGTTCGTACTGCCCCTCCATCTTCTCTCCGACAAAGTGGCGCGTTTCGATACTATTGGAGGTACATCTCCCTACAGCGGAGGTTTGTACTCTCGGGTGTTGGAGACCAAGCATAGGCTTAATGTTGGAGGCCAAACTACCAAAGATATGTTATTGAGAAACTGGATTCCAGATGATATTTATCTCACTTATCCGGAAAACGCCAAGAATCGTTCCCCTTACAATGGTCAAATCGAGTACCATGTAGGTGATGACTCCGATGGTCCAAACGCAACTAGTTATACAGCGCCAACTGAGGTGTACGGAACTGCTAAGGAGACTAATAACATCTCTAACATCTCTGCCACAGACTTTCAACTTTTAAACATAACGTGGGCTCTTCCGGTGGACAACAACGCAGATCATTTCCTTCGGCTTCACTTCTGTGACTATTGGAGTCAACAAGTTGGCGATACATTCTTTGAACTTTCCATTTATGACGCCCATGTTATGCAGGTAAATACTGACGGAAACGTGTCTAACGTGTTGCCTGCCCCTTATTATTATGATTTTGTGGTGCCCTCAGATGACTCTGGACATATTAAGGTCAGCGTAGCACCTAATGCAACCGCTCTCGTACCAAATGCGTTTTTAAACGGGCTAGAAATAATGAAAGTGATTGAATCATCAATTTCTGTCCCCCTTGACTTGGATGAATCGGATTCCAAGCATAATCGTCTTCCTCTGTTGCTCGGTTCAATTATCGGTGGCTTAGTCTTGGTTTTTGTTGTGGTGCTACTTGGCTTTCTTTGGTGGTTTAAAACGAGGAAGGAAAAACCCGTTGAGAATTCGGACTGGTTGCCGATTCCCGTTAATGCTGGAGGAAGTTCTCACAGCAGATTGACTGATATAACCAGTCACGGCTCTCCCCTTCCCAACATTAACCTTGGGCTCAAAATTCCCTTCATTGATCTTCAACTGGCAACAAAGAACTTCCACGCAAGTCAGCTGATTGGCAAGGGTGGTTTTGGCAACGTCTACAAGGGAGTTCTCAGGAATGGCGACACAGTGGCTGTCAAAAGAAGCCAGCCAGGGTCAGGTCAAGGACTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCTAAGATTCGCCACAGGCACCTTGTTTCCTTGATTGGGTATTGTGATGAAAGATTTGAGATGATACTGGTTTATGAATACATGGAAAAAGGGACACTCAGGGACCATTTGTATAATTCGAAGTTGCCAACCTTGTCGTGGAAGGTGAGGCTTCAAATTTGCATTGATGCTGCCAGAGGTCTTCATTACCTTCACAAAGGAGCAGCTGGGGGAATCATTCACCGTGATGTAAAGTCTACAAACATATTGCTTGATGAGAACCACGTTGCTAAAGTGGCTGATTTTGGTCTTTCAAGGTCAGGTCCTCTTGATACTCAACCGTATGTCAGCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCGGAGTATTTCAGATCACAACAGCTGACAGAAAAATCTGATGTCTATTCATTTGGGGTAGTTCTTTTGGAAGTGTTGTGTGCAAGAGCAGTGATCGACCCATCTCTTCCAAGAGATCAGATAAACTTGGCGGAGTGGGGATTGCTTTGCAAAAACAAGGGAATACTCCAAGAGATCATCGATCCTTCCATCAAGGAGCAAATCGATCAAAACTCACTCAGAAAATTTAGTGAGACGATAGAAAAGTGCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGGTGATGTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGAAAGGAGCAAATGCAATACAGAGAGAGCCGTATGAGGATAGTTCTAGTAGTGTTTCTGCGTCAATTCAACTGCCCAATGTTCGGCGTCTTCCTTCACTCACCACACTGAGTGAAGCGGATGATACCATTGTTAGGGATGATGAATCCGATAGTGCTGTGGATTACGTTTTCTCCCAGTTGAAAATTGATGATGCCAGATAG 2550 0.4376 MEILKLHRIQHSLCIQLVFLLQLSSLQFPSLGYNFPDKYFINCGSDNNVTESGKLYVGESNLEASFINSTTAKNESSVPSPLYQTARIFRRESWYKFKIDSNGTYLVRLHFFPFSSPSNLSSARFNVSVPRFWLLQNFNGRNATDNNSAVVKEFFMEISSPSFKITFRPLESSFAFVNAIELFVLPLHLLSDKVARFDTIGGTSPYSGGLYSRVLETKHRLNVGGQTTKDMLLRNWIPDDIYLTYPENAKNRSPYNGQIEYHVGDDSDGPNATSYTAPTEVYGTAKETNNISNISATDFQLLNITWALPVDNNADHFLRLHFCDYWSQQVGDTFFELSIYDAHVMQVNTDGNVSNVLPAPYYYDFVVPSDDSGHIKVSVAPNATALVPNAFLNGLEIMKVIESSISVPLDLDESDSKHNRLPLLLGSIIGGLVLVFVVVLLGFLWWFKTRKEKPVENSDWLPIPVNAGGSSHSRLTDITSHGSPLPNINLGLKIPFIDLQLATKNFHASQLIGKGGFGNVYKGVLRNGDTVAVKRSQPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERFEMILVYEYMEKGTLRDHLYNSKLPTLSWKVRLQICIDAARGLHYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPLDTQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARAVIDPSLPRDQINLAEWGLLCKNKGILQEIIDPSIKEQIDQNSLRKFSETIEKCLQEDGSDRPTMGDVLWDLEYALQLQKGANAIQREPYEDSSSSVSASIQLPNVRRLPSLTTLSEADDTIVRDDESDSAVDYVFSQLKIDDAR* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01502 849 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Lapu3g01502 849 SUPERFAMILY Protein kinase-like (PK-like) 483 777 IPR011009 -
Lapu3g01502 849 SMART serkin_6 506 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01502 849 Gene3D - 38 184 - -
Lapu3g01502 849 Gene3D - 215 401 - -
Lapu3g01502 849 CDD STKc_IRAK 512 777 - -
Lapu3g01502 849 FunFam Receptor-like protein kinase FERONIA 582 799 - -
Lapu3g01502 849 Pfam Malectin-like domain 41 400 IPR024788 -
Lapu3g01502 849 Pfam Protein tyrosine and serine/threonine kinase 508 773 IPR001245 GO:0004672|GO:0006468
Lapu3g01502 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Lapu3g01502 849 Gene3D Phosphorylase Kinase; domain 1 474 581 - -
Lapu3g01502 849 FunFam Putative receptor-like protein kinase 38 186 - -
Lapu3g01502 849 ProSiteProfiles Protein kinase domain profile. 506 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01502 849 FunFam receptor-like protein kinase FERONIA 471 581 - -
Lapu3g01502 849 PANTHER OS07G0166700 PROTEIN 493 783 IPR045272 GO:0004714|GO:0006468
Lapu3g01502 849 Gene3D Transferase(Phosphotransferase) domain 1 582 801 - -
Lapu3g01502 849 FunFam Putative receptor-like protein kinase 213 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01502 Lapu-Chr3 17586525 17589438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01502 12 849 Receptor kinase-like Gene Family AT2G23200 44.936 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu3g01502 Malectin_like 1.4e-24 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01502 - - gmx:100789555 1167.53