Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01475 ATGAGTTGCAACGGTTGCCGAGTTCTTCGAAAGGGATGTAGCGAATCCTGTGTGTTGCGTCCTTGTTTGCAGTGGATCGAAACCGCCGAAGCTCAAGGCCACGCCACTGTCTTCGTTGCCAAATTCTTTGGCCGTGCCGACCTCATGTCCTTTGTTTCCAACGTTCCACAAAATCAAAGACCTGCTCTGTTTCAGTCCCTCCTGTTCGAAGCGTGCGGGAGAACGGTCAACCCCGTCAATGGTGCTGTGGGCCTTCTCTGGACAGGAAACTGGCACGTGTGCCAGGCGGCCGTGGAGACCGTGCTCCGCGGCGGCACGTTAAGGCCCATGCCGGAGCTCATGGCGGTCACCTCTCCCGCTGCCGCCGCCGACGAGTCATCGGAAGTTGCATGCTCCGACATTTGGAGAATCCGAGACCCGAACCCGACTTGCGGCTTCCCGAACTCGAGATCTCATAACAAAGTCTCCTCCGCCAGCAAACGCAAGCGGTTGGAGGAGCCGGCGAAGCTTCAGGCTTCGCCGAATCTTGATCTCCGGCTGACGCCGATTTTCCTGCAGAAGAAGGTTGAGAACCGGCGGCCGGTGTCGCCGTCGATGACCTCCGAGGAGTCTGGTATGACGACGGCGTGCTTGGAGAGCAGGTTTGGGGATCAGTGGGCTCACAGCGGAGACCGGAAAGTTCTCAACCTTTTCATTTGA 699 0.5808 MSCNGCRVLRKGCSESCVLRPCLQWIETAEAQGHATVFVAKFFGRADLMSFVSNVPQNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELMAVTSPAAAADESSEVACSDIWRIRDPNPTCGFPNSRSHNKVSSASKRKRLEEPAKLQASPNLDLRLTPIFLQKKVENRRPVSPSMTSEESGMTTACLESRFGDQWAHSGDRKVLNLFI* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01475 232 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lapu3g01475 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 214 - -
Lapu3g01475 232 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Lapu3g01475 232 MobiDBLite consensus disorder prediction 145 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01475 Lapu-Chr3 17114082 17115529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01475 1 232 AS2 family AT4G37540 58.537 7.33e-88 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu3g01475 LOB 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01475 - - gmx:100816480 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00503 2 4314435 4315235 Lapu3g01475 3 17114082 17115529 ECH
Lapu3g01475 3 17114082 17115529 Lapu3g01475 3 17114082 17115529 ECH
Lapu3g01475 3 17114082 17115529 Lapu2g00503 2 4314435 4315235 PCT