Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01470 ATGAAACCTCATCATCGTCATTACGCCTTCTTTTTCATTCTATCATCCTTCTCTCTACTCCCCACTTCCAAACCTACCAACGCAACTCAATTCCGCATTTTCAATGAAACAAGAAGGATTCTCCACCAGCCTTTGTTCCCGGACCTCTCAGCTCCGCCGCCGCTCACCCCACCGCCGCCGCCTCCGCCGCCCGATACTCCTTCTTCTCCCGACATTCCTTTCTTCAATGAGTATCCTGCGGGGCAGCCTCCTCCAGTGCAGAACCTGCCGCCGGCAACAACCTCCGGCACCGTGATCGCGAATCCCACTGCCACGCAGCCCACCAAGCCAGCGAAGAAGGTGGCAATTGCGATCTCCGTGGGAATTGTGACGCTGGGAATGTTCTCCGCATTGGGGTTTTTCCTGTACAGGCACAGAGCAAAACACCCAGTGGAAACTCAGAAACTCGTTTCTCGGAGGGTTCTAGAAGATTCTCCGCGGGCCCCACCACCCTCGAGCTTCCTCTACATTGGGACGGTGGAGCCCGCCAGAACGTCGCTCACCGAACCCAACGGAACAAACATGATCACTTCTCCTTATCGAAAGCTTGATTCTATTAAGCTTAACTCCGATCACCGTTACCGCCCCAGTCCCGAGTTGCAGCCGCTTCCGCCGCCTCACAAGCCTCCGGACGAAAGCCACTCGCCGCCGGCGGGATTCTCCGACTCATCATCTTCCGAGGAGGAAAGCTGTGAGACGGCATTTCACTCGCCACACGGCTCGTCGCTAAGCCGCGAAGAGAATTATTTCACGCCCGTCTCGCGCCACAGTTCTCTCGCAGCCGCCGTACCAGCGGCGGCTGCAGCTGCTGCTCCGGTGGTGCCTTATTCGAAGAGAACTTCACCGAAATCCCGGTTCTCTGCTCCTTCGCCGGATATAACAAACATGATCGCACCATCGCTGAAGCATTCTCCGGCGCCGGCACTGGCACCGGCGCCACCAGCTTCAACCAAATATCAGCAAATAGAAAAAGTAATTCCCTTGGGTCCTTCTAGAAGACCCAAATTCTCATCGCCTCCCCCAGCACCGAATTTGACTCATCTTATAAAGCCTGCGCCAGCTCCTCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGTCACGGAAGGGATGGTCTGCGTCCATTAGTGCATCTTCGTCCTCTGTGTCAAGGAAGCAACGAGAGTCTTGGTCTCCAAATGAAGGAGGGTCTTCAGCTAACAGTGTTAGTGTAAGGAAAGGTTCTTCTGAGGAAGTTGACCAAAGACATGCAGGTGACGAAGTGGATGGAGCGAAACCAAAGTTGAAGGCTCTGCATTGGGATAAAGTTTGTGCTACTTCGGACCGTACCACTGTGTGGGATCAGTTAAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACCCTGTTTGGCTGCAAAACTACAGGTTCTGCTTTTAAAGAGACTGTTACTAGAAGATCAGTTCTTCCCCCTGTTGAACTCGAGAATAGGGTGTTAGACCCCAAGAAATCCCAAAACATAGCTATACTACTAAGGGCACTTAATGTCACAAGAGATGAGGTGTGCGAAGCTCTTTTGGATGGAAACCCTGAAGGTTTGGGAACTGAGCTATTGGAGACTCTAGTAAAGATGGCTCTAACAAAGGAGGAGGAAATAAAACTTAAAAATTATGATGGTGACCTATCAAGACTTGGTTCTGCCGAAAGATTTCTTAAAGCAGTGCTTGACATCCCTTTAGCTTTTAAAAGAATTGAAGCCATGCTGTACAGAGCTAACTTCGAAACAGAAGTTAACTACCTTAGGAAGTCCTTTCAGACACTGGAGGCAGCAAGTGAGGAATTAAAGAACAGTCGGTTATTCCTCAAACTTCTTGAAGCTGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACAAACCGTGGTGATGCTAAATCTTTCAAACTGGACACTCTTCTAAAACTTGTAGATATAAAGGGCACAGATGGGAAGACAACACTTCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGAACAGGTGGTGAATCTGCAAATGAAAATGTTCAAAACCAAACAACTTCCCAATTCAACGAGGACGAGTTCAGAAAGAAAGGATTACAGGTTGTGGCTGGACTGAGTAGAGACCTAGGTAATGTCAAAAAGGCAGCAGGAATGGACTCGGATGTGTTAAGCAGCTATGTCTCAAAGCTTGAAATTGGGCTTGACAAAGTGAGCTTAGTTTTGCAATGCAGAAAGCCAGATATGTATGGAAATTTCTTTAACTCAACTGGGCTATTTCTGAAAGATGCTGAAGAGGAAATTGTTAGGATCAAGGCTGATGAGAGAAAGGCCTTGTTCCTAGTGAAAGAAGTTACAGACTACTTTCATGGTGATGCAGCAAAGGAAGAAGCGCACCCTTTCAGAATTTTTATGATTGTGAGAGACTTTCTAAATAGTTTGGATCAAGTCTGTAAAGAAGTGGGAAGGATGCAGGATAGAACTGTGATTGGTTCAGCTAGATCCTTCAGGATAGCTGCAAGCGCATCATTACCTGTTCTCAACAGGTACCATGCAAGACAAGATAGAAGTTCAGATGAGGAAAGCTTATCGCCCTAG 2643 0.4851 MKPHHRHYAFFFILSSFSLLPTSKPTNATQFRIFNETRRILHQPLFPDLSAPPPLTPPPPPPPPDTPSSPDIPFFNEYPAGQPPPVQNLPPATTSGTVIANPTATQPTKPAKKVAIAISVGIVTLGMFSALGFFLYRHRAKHPVETQKLVSRRVLEDSPRAPPPSSFLYIGTVEPARTSLTEPNGTNMITSPYRKLDSIKLNSDHRYRPSPELQPLPPPHKPPDESHSPPAGFSDSSSSEEESCETAFHSPHGSSLSREENYFTPVSRHSSLAAAVPAAAAAAAPVVPYSKRTSPKSRFSAPSPDITNMIAPSLKHSPAPALAPAPPASTKYQQIEKVIPLGPSRRPKFSSPPPAPNLTHLIKPAPAPPPPPPPPPPPPSRKGWSASISASSSSVSRKQRESWSPNEGGSSANSVSVRKGSSEEVDQRHAGDEVDGAKPKLKALHWDKVCATSDRTTVWDQLKSSSFQLNEDMMETLFGCKTTGSAFKETVTRRSVLPPVELENRVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELLETLVKMALTKEEEIKLKNYDGDLSRLGSAERFLKAVLDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESANENVQNQTTSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEIGLDKVSLVLQCRKPDMYGNFFNSTGLFLKDAEEEIVRIKADERKALFLVKEVTDYFHGDAAKEEAHPFRIFMIVRDFLNSLDQVCKEVGRMQDRTVIGSARSFRIAASASLPVLNRYHARQDRSSDEESLSP* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01470 880 MobiDBLite consensus disorder prediction 421 436 - -
Lapu3g01470 880 ProSiteProfiles Formin homology-2 (FH2) domain profile. 431 855 IPR015425 -
Lapu3g01470 880 MobiDBLite consensus disorder prediction 285 436 - -
Lapu3g01470 880 SMART it6_source 431 844 IPR015425 -
Lapu3g01470 880 SUPERFAMILY Formin homology 2 domain (FH2 domain) 369 841 - -
Lapu3g01470 880 MobiDBLite consensus disorder prediction 211 226 - -
Lapu3g01470 880 MobiDBLite consensus disorder prediction 384 420 - -
Lapu3g01470 880 Pfam Formin Homology 2 Domain 436 829 IPR015425 -
Lapu3g01470 880 PANTHER FORMIN-RELATED 11 874 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu3g01470 880 MobiDBLite consensus disorder prediction 293 307 - -
Lapu3g01470 880 MobiDBLite consensus disorder prediction 91 107 - -
Lapu3g01470 880 MobiDBLite consensus disorder prediction 45 107 - -
Lapu3g01470 880 Gene3D Formin, FH2 domain 432 841 IPR042201 -
Lapu3g01470 880 MobiDBLite consensus disorder prediction 346 382 - -
Lapu3g01470 880 MobiDBLite consensus disorder prediction 47 70 - -
Lapu3g01470 880 MobiDBLite consensus disorder prediction 204 258 - -
Lapu3g01470 880 MobiDBLite consensus disorder prediction 230 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01470 Lapu-Chr3 16954754 16960072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01470 385 870 FH2 protein (formin) Gene Family AT5G67470 69.309 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01470 - - gmx:100803578 1307.74