Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01465 ATGGATACCTTGTTTAGACTAGTAAGTTTTCAACAGCAACAACCCGATCCTTCCCTCAACTCCACCGCCAGCAGAACTTCTAGCAGTTCCAGATCCTCCCGACAAAACTATTACCATTACTCCCACCAAGAAGACGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACTTATCCTCGTCTTCTTCCAAACACTACTACCCATACCACAACGTATCCACCGCCACCACCACCACCACAACCAACACCTTCAGCACCACCACCAACACCGATTACTCCTACTCCTTCTCCCCCACCCCTCCCCTCCCAGACTTCAACTTCCAATTCTCCCCCAACTGGTCCCACAACCTCCTCCTCGAAACCGCACGGGCCTTCGCCGACAACAATAGCACCCGCCTCCACCACCTCCTCTGGATGCTCAACGAACTCAGCTCTCCATACGGCGACACTGATCAAAAGCTCGCCGCGTATTTCCTCCAAGCCCTGTTCAGCCGCGTAACCGACGCGGGAGATCGAACCTACCGAACCTTGGCCTCGGCGTCGGAGAAAACATGCTCCTTCGAGTCAACGAGGAAGACGGTGTTGAAATTCCAGGAAGTCAGCCCCTGGACAACTTTCGGACACGTGGCGTCCAACGGCGCCATCTTAGAAGCCTTAGATGGACACCCCAAATTGCACATACTTGACATCAGCAACACCTATTGCACCCAATGGCCAACCCTTCTAGAAGCATTGGCAACTCGTACCGACGAAACTCCGCACCTCAGGTTAACCACCGTCGTCACCGGGAGGACCGGTAACTCCGTGCAGCGCGTCATGAAGGAAATCGGAACGAGAATGGAGAAGTTCGCGCGGCTCATGGGCGTTCCGTTCAAGTTCAACGTCGTTCACCACGCCGGCGATCTCTCAGACCTCAATTTCTCAGAACTCAACCTCAAAGACGACGAGGCCCTGGCCGTCAACTGCGTGAACGCGCTGCATTCTGTTTCCGCGGCGGGGAACGGCCGCGACGCGTTGATATCGTTGCTGCAAGGGTTGCAGCCGAGGATCGTGACGGTAGTGGAGGAGGAGGCAGATTTGGAAGTGGGAATCGAGGGCTACGAGTTCGTGAGAGGTTTCGAGGAGTGTCTGAAGTGGTTTAGGGTTTACTTCGAGGCGCTGGATGAGAGTTTCGTGAAGACGTGCAACGAGAGACTGATGCTAGAGCGCGCGGCGGGGAGGGCGGTGGTGGACCTGGTGGCGTGCTCACCGGCGGATTCAGTGGAGCGTCGGGAGACGGCAGCTAGGTGGGGGACGCGGCTGCATGGAGGAGGGCTAAGCGCGGTGCCGTTCAGCGAAGAGGTTTGCGACGACGTTAGGGCGCTGTTGAGAAGGTACAAGGAGGGTTGGTCGATGGCACCGTGCTCCGACGCCGGAATATTCCTTTCGTGGAAGGAAACTCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTAA 1473 0.5621 MDTLFRLVSFQQQQPDPSLNSTASRTSSSSRSSRQNYYHYSHQEDEECFNFYMDEEDLSSSSSKHYYPYHNVSTATTTTTTNTFSTTTNTDYSYSFSPTPPLPDFNFQFSPNWSHNLLLETARAFADNNSTRLHHLLWMLNELSSPYGDTDQKLAAYFLQALFSRVTDAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALDGHPKLHILDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTGRTGNSVQRVMKEIGTRMEKFARLMGVPFKFNVVHHAGDLSDLNFSELNLKDDEALAVNCVNALHSVSAAGNGRDALISLLQGLQPRIVTVVEEEADLEVGIEGYEFVRGFEECLKWFRVYFEALDESFVKTCNERLMLERAAGRAVVDLVACSPADSVERRETAARWGTRLHGGGLSAVPFSEEVCDDVRALLRRYKEGWSMAPCSDAGIFLSWKETPVVWASAWRP* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01465 490 MobiDBLite consensus disorder prediction 10 37 - -
Lapu3g01465 490 Pfam GRAS domain family 116 489 IPR005202 -
Lapu3g01465 490 ProSiteProfiles GRAS family profile. 105 489 IPR005202 -
Lapu3g01465 490 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 86 479 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01465 Lapu-Chr3 16880563 16882565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01465 1 490 GRAS Transcription Factor Family AT4G37650 59.662 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu3g01465 GRAS 1.6e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01465 - - gmx:100778524 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01465 3 16880563 16882565 Lapu3g01465 3 16880563 16882565 ECH
Lapu2g00489 2 4145642 4147777 Lapu3g01465 3 16880563 16882565 PCT