Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01459 ATGCGGGAGAGGCTTGATGGCGACTGCATTGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGACAAGTATTAAATTGCAATACCTATGAAGTTGCAACAGCTTGTGCCTCGGCTATAGGAGCAGATAAGCTTATATGCATTATAGATGGTCCTATACTGGATGAAAGTGGACACCTTATTCGCTTCTTGACTCTTCAAGAGGCAGACATGCTAATTCGTAAACGGGTTGAACAAAGTGAAACAGCTGCTAACTATGTGAAAGCTATTGCCGAAGCAAGCTTCAACTCTCCTAAAAAATTTAATGGGGCTCCGCAGAATGGAAAACCATTTTCAGAACGTCAGATTTCAACCTTTCATAATGGTATTGGTTTTGACAATGGGAATGGCCTTTGGTCTGGGGAGCAGGGTTTTGCTATAGGAGGTCAGGAGTCCCTAAGTCGAACGAATGGTTACCTGTCAGAGCTGGCTGCTGCGGCCTTCGTTTGTAGAGGCGGTGTTCAAAGAGTTCATTTGTTGGATGGCACTAATAGTGGAGTTCTATTGTTGGAATTGTTCAAGAGAGATGGGATGGGGACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGTAACAGATATTTCTGGAATAAAACAACTTATCCAGCCTTTAGAGGAGTCTGGCATATTAGTTATGCGGACTGATGAAGAGCTTCTTCGAACATTAGGCTCCTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGCGCTGCACTTCTTCCTTTCTTTGAGGAGAAGTGTGGAGAGGTTGCTGCAATTGCAGTATCCCCTGATTGTAGAGGCCAAGGTCAGGGAGACAAATTACTTGATTATATAGAGAAGAAGGCATCATATCTTGGATTTGAAATGCTTTTCTTGCTGACAACTCGTACAGCGGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTTTATACCTGAGAAGAAAAGGAAAAACATTAATCTATCCCGAAAGTCCAAGTACTACAGGAAGACGCTTCTACCTAATAAGAGTGGAATTCCTTTTGGTAGCAAATTTACTTCCCATTAG 1092 0.4258 MRERLDGDCIVILSNLGYSSSGQVLNCNTYEVATACASAIGADKLICIIDGPILDESGHLIRFLTLQEADMLIRKRVEQSETAANYVKAIAEASFNSPKKFNGAPQNGKPFSERQISTFHNGIGFDNGNGLWSGEQGFAIGGQESLSRTNGYLSELAAAAFVCRGGVQRVHLLDGTNSGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQLIQPLEESGILVMRTDEELLRTLGSFIVVEREGQIIACAALLPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASYLGFEMLFLLTTRTADWFVRRGFSECSIDFIPEKKRKNINLSRKSKYYRKTLLPNKSGIPFGSKFTSH* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01459 363 Gene3D - 200 347 - -
Lapu3g01459 363 PIRSF ArgA 1 347 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lapu3g01459 363 CDD NAT_SF 242 304 - -
Lapu3g01459 363 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 204 348 IPR016181 -
Lapu3g01459 363 SUPERFAMILY Carbamate kinase-like 148 197 IPR036393 -
Lapu3g01459 363 Pfam Acetyltransferase (GNAT) family 237 305 IPR000182 GO:0016747
Lapu3g01459 363 NCBIfam amino-acid N-acetyltransferase 156 347 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lapu3g01459 363 PANTHER AMINO-ACID ACETYLTRANSFERASE 1 354 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lapu3g01459 363 Hamap Amino-acid acetyltransferase [argA]. 1 347 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lapu3g01459 363 Gene3D - 1 198 IPR036393 -
Lapu3g01459 363 SUPERFAMILY Carbamate kinase-like 3 76 IPR036393 -
Lapu3g01459 363 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 201 348 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01459 Lapu-Chr3 16820839 16826567 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu3g01459 Acetyltransf_1 5.8e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01459 K14682 - gmx:100800925 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00484 2 4105590 4117819 Lapu3g01459 3 16820839 16826567 PCT