Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01451 ATGCTCACCACCGTCCCTCCCTCCGACCCCCTTCTCGGCAACCCATTCTCCGCCTTCCCTGCCGACTTCACCCCCTGGGACGATGACGACTCTCCCCTCCTCCTCTCCCCCAAACCCGTCACTTCCAGCTCCGGCTCCGACAAAGCCGACCCGGACCCAGGTGAAGCGGACCAACCCGTGGTCTCGGTGATGGAGGAGCGAAAACTTCGGCGCATGATATCGAACCGCGAATCTGCCCGCAGGTCTCGCATGCGAAAACAGAGACACCTGGAGAACCTTCGGAACCAGTTGAACAAGTGCAGGGTCGAAAACCGAGAACTGAATAACCGGTTGCAGTTCGTCCTGCACCACTGTAACCGCCTCCGAACCGAAAACGAATGGCTCCGGTCCCAGCGAACCCTCCTCCTCCAAAAAGTGGCCAACTTAACTCAAATTTTGATTTTCCAACAATTCCAACAACCCATCTCCCCTGCATGGACATGCAACACTTCGCTCATCCCTATTAATCAAGTTAATTAA 519 0.5568 MLTTVPPSDPLLGNPFSAFPADFTPWDDDDSPLLLSPKPVTSSSGSDKADPDPGEADQPVVSVMEERKLRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELNNRLQFVLHHCNRLRTENEWLRSQRTLLLQKVANLTQILIFQQFQQPISPAWTCNTSLIPINQVN* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01451 172 CDD bZIP_plant_GBF1 68 119 IPR045314 GO:0003700|GO:0006355
Lapu3g01451 172 Coils Coil 76 110 - -
Lapu3g01451 172 FunFam BZIP transcription factor 65 116 - -
Lapu3g01451 172 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 70 85 IPR004827 GO:0003700|GO:0006355
Lapu3g01451 172 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 149 - -
Lapu3g01451 172 Pfam bZIP transcription factor 67 126 IPR004827 GO:0003700|GO:0006355
Lapu3g01451 172 SUPERFAMILY Leucine zipper domain 67 119 IPR046347 GO:0003700|GO:0006355
Lapu3g01451 172 SMART brlzneu 63 127 IPR004827 GO:0003700|GO:0006355
Lapu3g01451 172 Gene3D - 65 118 - -
Lapu3g01451 172 MobiDBLite consensus disorder prediction 1 62 - -
Lapu3g01451 172 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 65 128 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01451 Lapu-Chr3 16666094 16667183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01451 1 150 bZIP Transcription Factor Family AT3G49760 40.000 6.49e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu3g01451 bZIP_1 1.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01451 - - gmx:100809244 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00476 2 4033320 4034428 Lapu3g01451 3 16666094 16667183 PCT