Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01447 ATGAAGAGCATAGAAAATGACGACTCTGTTGACCTTAATAATCAAAATAACTGGTTGGGTTTCTCACTCTCTCCTCAAATGAACGTAGGTGTTGCTTCACACCCTCAATCTTCCTCTGCTGCTGAAGTGGTTCCTACAAGCTTTTACCACACTGCACCTCTTAATAACTACGGCTTCTACTATGGACTTGAAGCTGAAAATGTTGGATTGTATTCAGCTTTGCCTACCATGCCCCTCAAATCTGATGGCTCTCTATATGGAATGGAAGCTCTCAGCAGGTCACAAACACAAGCAATGGCTACTACATCAACTCCAAAACTGGAGAATTTCTTAGGTGGGGAAGCGATGGGGACCCCTCACTATGAATGTAGTGTCACAGAAACAATGCCTCTGAGCTTAGACAGTGTGTTTTACAACCAATCCTCACGCCGTGACCCAAATAACCAAACTTACCAAAACCATGTCCAACACATTAGCACTCAACAACATCAGCAAGAGCTTCAAGCCCAACACTTATCATATTACTCTACCTTTAGAAACCATGATATGATGTTAGAGGGGTCGAAACAAAGTCAAACTTCAGACAGCAATCTTCAGGTTCCAAACATGGGTGATGATGGAGTTCCTGCTTCTGGTCTTAAGAGTTGGGGAGTAAGGAACTTCCAAACTAGCCATGCACAGGAGTCAAAGATGATTGTTCCTGTGGAGGAAAATAGAGGTGAATCAGGGTCCATTGGATCAATGGCTTGTGGGGATTTGCAGTCTTTAAGCTTGTCCATGAGTCCTAGCTCACAATCCAGTTGTGTGACTAGTTCGCACCGCACATCACCTGCTGTCATTGATTCTGTTGCCATGGATACAAAGAAAAGGGGACCTGAAAAGGTTGACCAGAAGCAAATAATTCATAGGAAGTCCATTGACACCTTCGGACAAAGAACATCCCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGTAGGTATGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAGGGCCAAAGCAGGAAAGGAAGACAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATCTGGCCGCACTCAAGTATTGGGGACCCTCCACTCACATAAACTTCCCTTTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACGAGACAGGAGTATGTTGCTCATTTAAGAAGAAAAAGCAGCGGATTCTCAAGAGGGGCTTCCATGTACAGAGGAGTAACAAGCAGACACCACCAACATGGAAGGTGGCAAGCACGAATTGGTAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGTACACAAGAGGAAGCAGCTGAAGCTTATGACATTGCTGCTATAAAATTCCGAGGAGTCAATGCTGTAACCAACTTTGACATAACAAGATATGATGTGGAGAAAATCATGGCAAGCAGCAACCTTCTTAGCAGTGAGCTAGCAAGGCGCAACCGAGAGACAGACAGTGGAACTCAGTATATTGATCATAATCATAAGTCCTCTGCGTATGATGACACTCAAGAAGCTATTCTAATGCAAAAGAGCTGTGAAAGTCAAAATGATCAGTGGAAGATGGTTCTCTATCAATCTTCTCAACAACTTGACCAGAATCCACCTAGAATTGAGAGTGACAGAACTAACCAATCCTTCTCGGTGGCTTTGGACAAAATGTTTCATCAAGAAGTAGTTGAATCAAGTAAGGTGAGAACGCATGCGTCAAATCCTTCTTCATTGGCCACAAGTTTGAATAGCTCAAGAGAAGGTAGCCCTGATAGGACAAGCTTGCCAATGCTCTCTGGAATGCCTTCAACTGCGTCAAAATTATTGTCTACCAATCCAAATAACGTGAATTCTTGGGATCCTTCACCCCATCTGAGGCCTGCCCTTTCTATGCCTCAGATGCCAGTTTTTGCTGCTTGGACAGATGCATAG 1980 0.4348 MKSIENDDSVDLNNQNNWLGFSLSPQMNVGVASHPQSSSAAEVVPTSFYHTAPLNNYGFYYGLEAENVGLYSALPTMPLKSDGSLYGMEALSRSQTQAMATTSTPKLENFLGGEAMGTPHYECSVTETMPLSLDSVFYNQSSRRDPNNQTYQNHVQHISTQQHQQELQAQHLSYYSTFRNHDMMLEGSKQSQTSDSNLQVPNMGDDGVPASGLKSWGVRNFQTSHAQESKMIVPVEENRGESGSIGSMACGDLQSLSLSMSPSSQSSCVTSSHRTSPAVIDSVAMDTKKRGPEKVDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASSNLLSSELARRNRETDSGTQYIDHNHKSSAYDDTQEAILMQKSCESQNDQWKMVLYQSSQQLDQNPPRIESDRTNQSFSVALDKMFHQEVVESSKVRTHASNPSSLATSLNSSREGSPDRTSLPMLSGMPSTASKLLSTNPNNVNSWDPSPHLRPALSMPQMPVFAAWTDA* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01447 659 PRINTS Ethylene responsive element binding protein signature 316 327 IPR001471 GO:0003700|GO:0006355
Lapu3g01447 659 PRINTS Ethylene responsive element binding protein signature 458 478 IPR001471 GO:0003700|GO:0006355
Lapu3g01447 659 Pfam AP2 domain 315 373 IPR001471 GO:0003700|GO:0006355
Lapu3g01447 659 Pfam AP2 domain 418 468 IPR001471 GO:0003700|GO:0006355
Lapu3g01447 659 CDD AP2 314 381 IPR001471 GO:0003700|GO:0006355
Lapu3g01447 659 SUPERFAMILY DNA-binding domain 314 383 IPR016177 GO:0003677
Lapu3g01447 659 Gene3D AP2/ERF domain 417 478 IPR036955 GO:0003700|GO:0006355
Lapu3g01447 659 Gene3D AP2/ERF domain 314 383 IPR036955 GO:0003700|GO:0006355
Lapu3g01447 659 ProSiteProfiles AP2/ERF domain profile. 315 381 IPR001471 GO:0003700|GO:0006355
Lapu3g01447 659 ProSiteProfiles AP2/ERF domain profile. 417 476 IPR001471 GO:0003700|GO:0006355
Lapu3g01447 659 Coils Coil 382 402 - -
Lapu3g01447 659 SMART rav1_2 417 482 IPR001471 GO:0003700|GO:0006355
Lapu3g01447 659 SMART rav1_2 315 387 IPR001471 GO:0003700|GO:0006355
Lapu3g01447 659 FunFam AP2-like ethylene-responsive transcription factor ANT 314 383 - -
Lapu3g01447 659 SUPERFAMILY DNA-binding domain 416 477 IPR016177 GO:0003677
Lapu3g01447 659 MobiDBLite consensus disorder prediction 583 637 - -
Lapu3g01447 659 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 103 555 - -
Lapu3g01447 659 MobiDBLite consensus disorder prediction 581 644 - -
Lapu3g01447 659 FunFam AP2-like ethylene-responsive transcription factor 416 478 - -
Lapu3g01447 659 CDD AP2 416 478 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01447 Lapu-Chr3 16609730 16613740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01447 243 500 AP2-EREBP Transcription Factor Family AT4G37750 75.175 2.60e-141 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lapu3g01447 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01447 K09285 - gmx:100787611 1127.08