Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01431 ATGCGACTCCTCCTCTGCTCGATCTTCTTCTTCTTCTTCTTTTCCTTCTTTCATTTTCACACAATCTACACTGCGGCCATATCAGAATATCGCGCACTTCTCTCATTCAAAGACTCTTCCATAACCGACGACCCTACCCATGTTCTTTCCTCCTGGAACTCCTCCACCCCCTACTGTTCCTGGTTCGGCGTCACGTGCGACTCCCGCCGCCACGTGACCACCCTTAACCTCACCTCCTTGTCCCTCTCTGGCACCCTCTACGATGACCTCTCCCACCTCCCTTTCCTCTCCCACCTCTCCCTCGCCGACAACAAGTTCTCCGGCCCCATCCCCGCCTCCTTTTCCGCCCTCTCCGCCCTCCGCCATCTCAACCTCTCCAACAACGCCTTCAACGCCACCTTCCCCTCAAACCTCGCGCTCCTCGCCAACCTCCAAGTCCTTGACCTCTACAACAACAACATGACCGGGCCTCTCCCCCTCGCCGTCGCCGCCATGCCCCTCCTTCGCCACCTCCACCTCGGCGGCAATTTTTTCTCCGGCCAGATCCCCCCCGAGTATGGTACCTGGCAGCACCTCCAGTACCTCGCCCTCTCCGGCAACGAACTGGCGGGAAACATCCCTCCGGAGCTCGGAAACCTCACCGCGCTTCGCGAGCTCTACATTGGCTACTACAACGCTTACTCCGGCGGCATCCCGCCGGAGATGGGAAACCTGTCCCAGCTTGTCCGTTTCGACGCCGCGTATTGCGGACTCTCCGGCGAGATTCCGGCTGATCTCGGAAGACTGCAGAATATGGATACGCTGTTTCTTCAGGTGAATGCGCTCTCCGGCTCGCTCACTCCTGAGCTGGGGAGCCTAAAGAGCCTCAAGTCGATGGATCTGTCCAACAACATGCTCTCCGGTGAGGTTCCGGCGAGCTTTGCGGAGCTCAAGAATCTCACTCTGCTGAACCTATTCCGGAACAAGCTCCACGGTGCCATTCCGGAGTTTGTCGGAGAGTTACCGGCACTGGAGGTGTTGCAGCTTTGGGAGAACAACTTCACAGGAAGCATTCCTCAGAGTTTGGGTAGAAATGGAAAACTCACTCTCGTTGATCTTTCTTCGAACAAGTTAACGGGAATGCTTCCTCCTGATATGTGTTATGGGAATCGTCTTCAGACTCTGATAACTCTGGGGAATTATCTGTTTGGTCCCATTCCCGATTCGCTTGGGAAGTGTGAGTCTTTGAGTAGGATTCGAATGGGGGAGAACTTTCTTAATGGTTCTATTCCAATTGGTCTATTTGGGCTTCCGAAACTCACCCAAGTCGAGCTTCAGAACAATCTTCTCACGGGGCAGTTTCCGGAGGGTGGTTCCATTGCTGTTAATCTCGGTCAGATTAGTCTCTCTAATAACAAGCTCTCTGGGCCGTTGCCACCCACCATTGGAAACTTCACCAGCATGCAGAAGCTTCTTCTCGATGGTAACAAGTTCTCGGGTCAAATCCCTTCGCAGATAGGGAGGCTGCAACAGCTTTCCAAGATTGATTTTAGCCATAACAAGTTTTCGGGTCCCATGGCTCCTGAGATAAGTCGGTGCAAGCTCTTGACCTTCATTGATCTCAACCGCAATGAGCTCTCTGGTGAAATTCCAAACCAGATAACTGCCATGCGGATACTGAATTATCTCAACCTTTCAAGAAATCATTTAGTTGGCTCCATTCCAGGGTCCATAGCTTCTATGCAAAGTTTAACTTCTGTTGATTTTTCATACAACAATCTCTCTGGTTTGGTTCCTGGAACCGGACAGTTCGGCTACTTTAACTATACCTCTTTCTTAGGGAACCCTGAACTCTGTGGTCCTTATTTGGGTCCTTGTAAAGACGGCGTTGCCAATGGCCCTCGTCAACCTCATGTTAAAGGTCCTCTCTCGTCTTCGTTGAAGCTTCTGTTAGTTATAGGGTTGCTTGTGTGCTCCATTGCATTTGCTGTTGCAGCAATAATCAAAGCTCGGGCTTTGAAAAAGGCTAGTGAAGCTCGTGCGTGGAAATTAACTGCATTCCAGCGTTTAGACTTCACTGCTGATGATGTTTTGGACTGCTTGAAGGAGGACAACATAATAGGGAAAGGAGGTGCAGGCATTGTGTACAAAGGTGCAATGCCGAATGGGGATCAGGTTGCTGTGAAAAGGTTACCTGCCATGAGCAGAGGATCTTCCCACGACCATGGTTTCAATGCTGAGATTCAGACTTTGGGGAGGATTCGACACAGACACATTGTAAGACTGTTGGGCTTCTGTTCAAACCACGAGACAAATCTCTTGGTGTACGAGTATATGCCTAATGGAAGTTTAGGTGAGGTTCTTCACGGCAAGAAAGGTGGTCATTTGCATTGGGACACAAGGTATAAGATTGCCGTGGAGGCTGCGAAGGGTCTTTGCTATCTGCACCATGACTGTTCGCCGCTCATTGTCCATCGAGATGTTAAATCTAACAATATCCTTCTTGATTCCAACTTTGAAGCACATGTTGCGGATTTTGGGCTCGCTAAGTTCCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCAATTGCCGGTTCTTATGGATACATAGCCCCAGAGTATGCATACACGTTGAAAGTTGATGAGAAAAGTGACGTGTACAGCTTTGGAGTGGTTCTTTTGGAGCTTGTAACAGGAAGAAAACCGGTTGGGGAGTTTGGTGATGGTGTGGACATTGTGCAATGGGTGAGGAAAATGACGGACTCAAACAAGGAAGGAGTTCTAAAGGTTCTTGATCCTAGACTTCCCTCAGTTCCACTCCATGAGGTGATGCATGTTTTCTATGTAGCCATGCTATGTGTTGAGGAACAGGCAGTGGAACGACCAACTATGCGAGAAGTTGTTCAAATTCTGACCGAGCTTCCAAAGCCCCCAAGCTCAAAACAGGGAGACTTAACCATCACGGAGTCCTCTCTGTCATCATCAAACAGTTTAGAGTCGCCAACCACGGCATCTAAGGAAACTAAAGATGATCAACAACCTCCTCAGTCTCCTCCACCTGATCTTCTTAGCATTTGA 3060 0.499 MRLLLCSIFFFFFFSFFHFHTIYTAAISEYRALLSFKDSSITDDPTHVLSSWNSSTPYCSWFGVTCDSRRHVTTLNLTSLSLSGTLYDDLSHLPFLSHLSLADNKFSGPIPASFSALSALRHLNLSNNAFNATFPSNLALLANLQVLDLYNNNMTGPLPLAVAAMPLLRHLHLGGNFFSGQIPPEYGTWQHLQYLALSGNELAGNIPPELGNLTALRELYIGYYNAYSGGIPPEMGNLSQLVRFDAAYCGLSGEIPADLGRLQNMDTLFLQVNALSGSLTPELGSLKSLKSMDLSNNMLSGEVPASFAELKNLTLLNLFRNKLHGAIPEFVGELPALEVLQLWENNFTGSIPQSLGRNGKLTLVDLSSNKLTGMLPPDMCYGNRLQTLITLGNYLFGPIPDSLGKCESLSRIRMGENFLNGSIPIGLFGLPKLTQVELQNNLLTGQFPEGGSIAVNLGQISLSNNKLSGPLPPTIGNFTSMQKLLLDGNKFSGQIPSQIGRLQQLSKIDFSHNKFSGPMAPEISRCKLLTFIDLNRNELSGEIPNQITAMRILNYLNLSRNHLVGSIPGSIASMQSLTSVDFSYNNLSGLVPGTGQFGYFNYTSFLGNPELCGPYLGPCKDGVANGPRQPHVKGPLSSSLKLLLVIGLLVCSIAFAVAAIIKARALKKASEARAWKLTAFQRLDFTADDVLDCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPSSKQGDLTITESSLSSSNSLESPTTASKETKDDQQPPQSPPPDLLSI* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01431 1019 Gene3D Transferase(Phosphotransferase) domain 1 772 984 - -
Lapu3g01431 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 338 623 - -
Lapu3g01431 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 772 982 - -
Lapu3g01431 1019 Gene3D Ribonuclease Inhibitor 23 88 IPR032675 -
Lapu3g01431 1019 Gene3D Ribonuclease Inhibitor 89 354 IPR032675 -
Lapu3g01431 1019 SUPERFAMILY L domain-like 304 619 - -
Lapu3g01431 1019 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lapu3g01431 1019 SMART serkin_6 694 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01431 1019 Pfam Protein tyrosine and serine/threonine kinase 696 965 IPR001245 GO:0004672|GO:0006468
Lapu3g01431 1019 SUPERFAMILY RNI-like 75 396 - -
Lapu3g01431 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 23 86 - -
Lapu3g01431 1019 MobiDBLite consensus disorder prediction 969 1019 - -
Lapu3g01431 1019 Gene3D Ribonuclease Inhibitor 358 623 IPR032675 -
Lapu3g01431 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 663 771 - -
Lapu3g01431 1019 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 385 966 - -
Lapu3g01431 1019 SUPERFAMILY Protein kinase-like (PK-like) 690 965 IPR011009 -
Lapu3g01431 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Lapu3g01431 1019 SMART LRR_typ_2 117 140 IPR003591 -
Lapu3g01431 1019 SMART LRR_typ_2 574 597 IPR003591 -
Lapu3g01431 1019 SMART LRR_typ_2 334 358 IPR003591 -
Lapu3g01431 1019 SMART LRR_typ_2 141 164 IPR003591 -
Lapu3g01431 1019 SMART LRR_typ_2 478 502 IPR003591 -
Lapu3g01431 1019 SMART LRR_typ_2 93 116 IPR003591 -
Lapu3g01431 1019 SMART LRR_typ_2 165 191 IPR003591 -
Lapu3g01431 1019 SMART LRR_typ_2 286 309 IPR003591 -
Lapu3g01431 1019 ProSiteProfiles Protein kinase domain profile. 694 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01431 1019 Gene3D Phosphorylase Kinase; domain 1 661 771 - -
Lapu3g01431 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 87 330 - -
Lapu3g01431 1019 MobiDBLite consensus disorder prediction 969 1006 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01431 Lapu-Chr3 16346584 16350949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01431 18 995 Receptor kinase-like Gene Family AT5G65700 80.325 0.0 1603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu3g01431 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01431 - - gmx:100499646 1787.7