Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01423 ATGAGATCAACGAAGAATAGTAAGAAGAAAGGTTTGATAAGGTACTGCCAAGCAGTGCTGAAATCCTTAAAAACTGGTCGCGCAACTGAAATAGAAACGTGGAAGCAGTTGGTATTGGAACCCACCACCAACAGTTGTAGTGCATCTGATATTGTTCTAACAGAACCTGGCCTTAGTGTTATTACTAGTACTGTTTTGACCAGCCGAGCTATATTTCAGAGAATGAAAAACTATACAGTAAGCTATTTATCTTCTCAACAATAA 264 0.3826 MRSTKNSKKKGLIRYCQAVLKSLKTGRATEIETWKQLVLEPTTNSCSASDIVLTEPGLSVITSTVLTSRAIFQRMKNYTVSYLSSQQ* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01423 87 Gene3D - 47 56 IPR023214 -
Lapu3g01423 87 Gene3D - 57 85 - -
Lapu3g01423 87 PANTHER CALCIUM-TRANSPORTING ATPASE 44 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01423 Lapu-Chr3 16061323 16062215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01423 38 84 Primary Pumps ATPases AT5G62670 72.340 2.96e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01423 K01535 - csin:114304476 66.6254