Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01417 ATGGCTGATGCAGCTGGCATGCCTGAGCAGGAGACACCAGTGTGTGTCCATCCAAGGTTGGATGTCTATGTTTGGGACATGGATGAGACGCTTGTACTACTCAACTCTTTGCTGAAATCATCATACGCCGAGGCTTTTAACGGTCTGAAGGATGTGCAGAAGGGAGTTGAAATCGGGACGATGTGGGAAAATCTCATTTTACAAACATGTGATGATTATTTCTTCTATGAACAAATTGAAAATTACAACAAGCCATTTCTTGATGCTCTGACCCAATATGATGATGGGAGGGACCTATCTGATTATGACTTCAACCAAGATGAATTAGGTTCCCCTGATGATGATGTCAACAAAAGAAAACTTGCATATAGGCATCGAGTCATTGCCCAAAAGTACATAGAGGGTTTACAGAATATTTTAGATCACGAGACAATAAAATACTGGGATGAATTGTATGATAAAACTGATGAATACACTGACAGGTGGCTTTCATCAGCGCATACCTTTTTGAAGGAGTGTTCGGGTGAAGTTGAAGATCAAGTTTCTTCAATTGCTTCTTCTAATACCAGCTCTAACTCAACCAATGTAAAGCATGTTAATGTTTTAGTAACCTCTGGATCATTAATTCCCTCACTTGTCAAATGCCTGCTCTTTCGGCTGGACAGCTTGATAAGACATGGAAATGTTTATAGCTCATGGGAAGTGGGGAAAATTCAATGTTTTCGATGGATCAAGGAGCGATTCAACCATCCTAATGTTCGGTTTTGTGTATTTGGAGACGGATGGGAAGAATGTGAAGCTGCGGAAATCATGAGATGGCCATTTGTTAAGATTGATCCACGGCCAGGAAAACTTCACAGGTTCCCTGGTCTTACTTTGACAACTGTTAACCACTACTTTTCTGTGGTATATAGCAATGAGAATGAAGATGGTGCCAATTGCTTTTGA 948 0.4072 MADAAGMPEQETPVCVHPRLDVYVWDMDETLVLLNSLLKSSYAEAFNGLKDVQKGVEIGTMWENLILQTCDDYFFYEQIENYNKPFLDALTQYDDGRDLSDYDFNQDELGSPDDDVNKRKLAYRHRVIAQKYIEGLQNILDHETIKYWDELYDKTDEYTDRWLSSAHTFLKECSGEVEDQVSSIASSNTSSNSTNVKHVNVLVTSGSLIPSLVKCLLFRLDSLIRHGNVYSSWEVGKIQCFRWIKERFNHPNVRFCVFGDGWEECEAAEIMRWPFVKIDPRPGKLHRFPGLTLTTVNHYFSVVYSNENEDGANCF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01417 315 SUPERFAMILY HAD-like 20 284 IPR036412 -
Lapu3g01417 315 FunFam Eyes absent homolog 21 288 - -
Lapu3g01417 315 Gene3D - 21 288 IPR038102 -
Lapu3g01417 315 PANTHER EYES ABSENT 20 300 IPR028472 GO:0004725
Lapu3g01417 315 NCBIfam EYA conserved domain 21 296 IPR006545 GO:0007275
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01417 20 313 Protein tyrosine phosphatase (PTP) family AT2G35320 61.224 9.91e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01417 - K17620 gmx:100791661 555.829