Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01411 ATGGGAAGTGGAGTTTCAAGCCTGTGTTGGTGCTACAGGAGGAACCAAGGGTGCCACCAGGACGTTATATTCACCGCCACCGAGCCATTGGACGAAACCCTAGGTCACTCCTTCTGCTACGTCAGATCCTCCGCTCGCTTCCTCTCACCTACTCACTCCGATCGCTTCCTCAGCCCCTCCACCTCCCTCCGCTACTCCCCCGCTCATGAACCCCGAACCCGACCCGAATCCCATGAAACCGGCTTCAAAGCCATTTCCGGAGCCTCCGTTAGCGCCAACAGCTCTCTCCCCACCACCGTCATTCACTTTGACGAAGACACCCCCGATTGCGTCGGAGCTGCCACCAAGGGCAATATCGTCAATGGCTTCGAAAGCACGGCATCGTTTACCGCGCTCCCGCTCCAGCCCGTTCCCCGAGGTGGCGAGCCCTTCGAGGTCAGCGGCTTCTTCCTCTCCGGTCCAATTGAAGCCAACGCCGTCTCCGGTCCTCTCCCCGCCTCTGTAGATGGTGGCGGCGGCGGCGAAGTTCCTTTTTCCGCGCCGCTCAGCGGGCTCTACGGTAAGAAGAACAGGAAGAAGAAGGTGATTTCGGGATTCCGGAAGGCGTTCAGTCGGAACACGCGGGAGATGAAGCGGCCGTGGGTGGTTCCGGTGCCGGAGAAGAAGGAGGCGGCGGCGGCGGAGTCGAGGGGCGCTGAGGGCAATGTGCAGTGGGCGTTGGGGAAGGCTGGGGAGGATCGCGTCCACGTGGTGGTGTCCGAGGAGCAAGGCTGGTTGTATGTTGGGATTTACGACGGTTTTAACGGTCCCGACGCGCCGGAGTTTCTGATGGGGCACCTCTACCGCGCCGTTCACAGCGAGCTTCAAGGTTTGTTCTGGGAGCTGGAGGACGAGCAACCATTGCCCCAAGAGAGTAATCCCGTGGTGGAAGGAACGGAGAGTAAACGGCGTAAACTGTGGGAGCTTCTGGCTGAGGACGGACTCGACCTTTCTGGTTCGGATAGGTTTGCGTTTTCCGTGGACGATGCGTTGAGCGTTAACAATGCCAATGCGGGGTCTGCTGTGAGTAGGAGGTGGCTGTTGCTGTCGAAGTTGAAGCAGGGGTTGTCGAAGCAGAAGGAGGGTGACGGGAGAGGGTGGAATTTGGGGAATGAGGAGAAGGAAAAGGAGAAAGCCTGTGGGAGGAAGCGCAAGGTGGGTCCTGTGGATCATGCACTTGTTTTGAGTGCGTTGTCTCGGGCACTTCAGGTCTCGGAGGTTGCGTATTTGGATATGACGGATAAGCTGCTGGATACGAATCCAGAGCTTGCTTTGATGGGTTCGTGTTTGTTGGTTGTGTTGATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGTAGGGCTATTGTTGCACACTATGAACCCAAGGATGTTGATTCTAGTGTTGAACCGGGAAGCAAGGCTGGTGTTGAGTCCGGTGCCGAGAGCATAGTTGAAGAGTCACTGGGTTTGGATCAAAGTGCAAGTGCTCAACAAATGAGGTTGATGGCATTGCAGCTCTCTACTGACCACAGCACCAGCATTGAAGAAGAAATCATTAGGATTAAAAACGAGCATCCTGATGACACCCAATGTATAGTCAATGATAGAGTTAAAGGTCGTCTGAAGGTCACCAGAGCCTTTGGGGCTGGATTTTTGAAACAGCCGAAGTTGAATGATGCAGTACTAGAGATGTTTCGCAATGAATATATTGGCACTGCTCCGTATATATCCTGCTCTCCTTCATTACGTCACCATAGATTATGCCAGAGAGATCAGTTTCTGATCCTCTCATCTGATGGTTTATATCAATATCTAAACAATGAAGAAGTGGTTTCTCATGTTGAGAGCTTCATGGAAAAATTTCCTGAAGGAGATCCAGCCCAACATTTAATAGAAGAGGTGCTTCTCCGTGCAGCTAAGAAAGCTGGAATGGATTTTCATGAATTGCTCGATATACCACAAGGAGATCGGAGGAAGTATCACGATGATGTTACTGTCATGGTGATATCTCTTGAAGGGAGAATCTGGAAATCGTCAGGAAAATATCCATGA 2079 0.5281 MGSGVSSLCWCYRRNQGCHQDVIFTATEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPSTSLRYSPAHEPRTRPESHETGFKAISGASVSANSSLPTTVIHFDEDTPDCVGAATKGNIVNGFESTASFTALPLQPVPRGGEPFEVSGFFLSGPIEANAVSGPLPASVDGGGGGEVPFSAPLSGLYGKKNRKKKVISGFRKAFSRNTREMKRPWVVPVPEKKEAAAAESRGAEGNVQWALGKAGEDRVHVVVSEEQGWLYVGIYDGFNGPDAPEFLMGHLYRAVHSELQGLFWELEDEQPLPQESNPVVEGTESKRRKLWELLAEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKQGLSKQKEGDGRGWNLGNEEKEKEKACGRKRKVGPVDHALVLSALSRALQVSEVAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKDVDSSVEPGSKAGVESGAESIVEESLGLDQSASAQQMRLMALQLSTDHSTSIEEEIIRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTAPYISCSPSLRHHRLCQRDQFLILSSDGLYQYLNNEEVVSHVESFMEKFPEGDPAQHLIEEVLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01411 692 Gene3D - 218 687 IPR036457 -
Lapu3g01411 692 Pfam Protein phosphatase 2C 514 649 IPR001932 -
Lapu3g01411 692 SMART PP2C_4 229 678 IPR001932 -
Lapu3g01411 692 SUPERFAMILY PP2C-like 242 681 IPR036457 -
Lapu3g01411 692 MobiDBLite consensus disorder prediction 59 79 - -
Lapu3g01411 692 ProSiteProfiles PPM-type phosphatase domain profile. 229 680 IPR001932 -
Lapu3g01411 692 PANTHER PROTEIN PHOSPHATASE 2C 221 679 IPR015655 GO:0004722|GO:0006470
Lapu3g01411 692 CDD PP2Cc 406 680 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01411 Lapu-Chr3 15905454 15910193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01411 1 691 PP2C-type Phosphatase Gene Family AT2G35350 55.820 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01411 - - gmx:100779143 1158.67