Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01386 CTGCGTCTGCTCCATTCATTCGTTCACCGCCCCAAACCTCCCTGCAGCGCCTTCGATCCAGGAAACATGACTAAGAGAACAAAGAAGGCTGGCATTGTTGGAAAATACGGTACCCGTTATGGTGCCAGTCTGCGGAAGCAGATTAAGAAGATGGAAGTTAGTCAACACAGCAAGTTCTTCTGTGAATTTTGTGGAAAGTATGCTGTGAAGAGAAAAGCCGTGGGAATATGGGGATGCAAGGACTGTGGTAAAGTGAAAGCAGGGGGTGCTTACACTTTGAACACCGCAAGTGCCGTGACTGTTCGGAGCACCATCAGGAGGTTGAGAGAGCAAACCGAGGGCTAA 345 0.4957 LRLLHSFVHRPKPPCSAFDPGNMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01386 114 Pfam Ribosomal L37ae protein family 26 110 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lapu3g01386 114 SUPERFAMILY Zn-binding ribosomal proteins 32 104 IPR011332 GO:0006412
Lapu3g01386 114 Gene3D - 23 114 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lapu3g01386 114 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 26 94 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lapu3g01386 114 FunFam 60S ribosomal protein L37a 24 114 - -
Lapu3g01386 114 NCBIfam ribosomal protein eL43 23 113 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lapu3g01386 114 PANTHER ZGC:171772 18 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01386 Lapu-Chr3 15493171 15495309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01386 23 114 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 92.391 2.80e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01386 K02921 - csin:114301577 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01386 3 15493171 15495309 Lapu3g01386 3 15493171 15495309 ECH