Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01327 ATGGCTCCACTCTTCATCTTCTTGCAAATGTTTTTGGTTTTCAGTTGTTGCATATTATTGCATGCAACGACTCTCACATGCACAGCCTACCACACCACCACCCCCAAAATGGTGTCTTCCACAAACTCATCCAAGTGGGTCGAACCCACCGGAAACCGAGTAATCACCGTCGACATTAACGGGGGAGGCCATTTCCGATCAGTCCAAGCCGCCGTCAATGCTGTCCCGGACAACAACAGAATGAACGTCCTTATTCAGATAGGCCCCGGATATTACATAGAGAAGGTGGTAGTGCCCGTGACGAAGCCGTACATTACATTTGAAGGAGCGGGAAGAGATGTGACGGTGATAGAATGGCATGATAGGGCCAGTGACCCTGGTCCCAACGGCCAACAACTGCGTACTTACAGAACAGCTTCTGTTACTGTTTTTGCCAACTATTTCTCTGCTAGGAATATCAGCTTCAAGAACACTTCTCCGGCGCCGATGCCGGGAATGGAGGGTTGGCAAGCGGCGGCGTTTCGCATTTCCGGGGACAAAGCCTATTTCTCCGGCTGCGGGTTCTACGGTGCACAAGACACTCTTTGCGACGATGCTGGCCGTCACTACTTCAAAGAATGTTACATTGAGGGTTCCATAGATTTCATTTTTGGGAATGGCAGATCCATGTACAAGGATTGCAGGCTACACTCAATTGCGACGAGATTTGGGTCAATTGCAGCCCAAGATAGGAGATCCCCATACGAGAAAACAGGCTTCGCATTCGTACGGTGCAAGGTGACAGGAACAGGCCCGATTTATGTGGGCCGTGCAATGGGCCAGTACTCTAGGATTGTCTATGCCTACACCTACTTCGACAACATAGTTGCACATGGTGGTTGGGATGATTGGAACACTTCCTATAATAACAAGACTGTGTTCTTTGGAGTGTACAAATGCTGGGGACCAGGTGCTGCGGCTATACGTGGAGTCCCATTAGCACAAGAACTGGATTTTGAATCTGCACATCCATTCCTGGTCAAGAGTTTTGTTAATGGGAGACACTGGATGGCACCCTCTGATGCCTAG 1068 0.4944 MAPLFIFLQMFLVFSCCILLHATTLTCTAYHTTTPKMVSSTNSSKWVEPTGNRVITVDINGGGHFRSVQAAVNAVPDNNRMNVLIQIGPGYYIEKVVVPVTKPYITFEGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTSPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCRLHSIATRFGSIAAQDRRSPYEKTGFAFVRCKVTGTGPIYVGRAMGQYSRIVYAYTYFDNIVAHGGWDDWNTSYNNKTVFFGVYKCWGPGAAAIRGVPLAQELDFESAHPFLVKSFVNGRHWMAPSDA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01327 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 48 350 - -
Lapu3g01327 355 ProSitePatterns Pectinesterase signature 2. 209 218 IPR033131 -
Lapu3g01327 355 Gene3D - 50 354 IPR012334 -
Lapu3g01327 355 FunFam Pectinesterase 50 352 - -
Lapu3g01327 355 Pfam Pectinesterase 55 346 IPR000070 GO:0030599|GO:0042545
Lapu3g01327 355 SUPERFAMILY Pectin lyase-like 52 352 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01327 Lapu-Chr3 14584550 14589031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01327 6 355 Carbohydrate Esterase AT5G47500 71.225 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01327 - - gmx:100796327 662.914